CFDEM Installation Error

Submitted by Ritwik on Sun, 01/07/2018 - 15:01

Hi,
Please help me out.
I have installed VTK 8.1.0 version.

When I run cfdemSysTest and separately cfdemCompCFDEMall, following message coming.

$ cfdemSysTest

*********************************************
* C F D E M (R) c o u p l i n g *
* *
* by DCS Computing GmbH *
* www.dcs-computing.com *
*********************************************

*********************************
CFDEM(R)coupling system settings:
*********************************
CFDEM_VERSION=PUBLIC
couple to OF_VERSION=5.0
compile option=Opt

check if paths are set correctly
valid:yes critical:yes - $CFDEM_PROJECT_DIR = /home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0
valid:yes critical:no - $CFDEM_PROJECT_USER_DIR = /home/ritwik/CFDEM/ritwik-PUBLIC-5.0
valid:yes critical:yes - $CFDEM_SRC_DIR = /home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src
valid:yes critical:yes - $CFDEM_SOLVER_DIR = /home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/applications/solvers
valid:yes critical:yes - $CFDEM_TUT_DIR = /home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/tutorials
valid:yes critical:yes - $CFDEM_LIGGGHTS_SRC_DIR = /home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src
valid:yes critical:yes - $CFDEM_LIGGGHTS_LIB_PATH = /home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src
valid:yes critical:yes - $CFDEM_LPP_DIR = /home/ritwik/LPP/src
valid:yes critical:yes - $CFDEM_ADD_LIBS_DIR = /home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/etc/addLibs_universal
valid:yes critical:yes - $CFDEM_LIB_DIR = /home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib
valid:yes critical:yes - $CFDEM_APP_DIR = /home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/bin
valid:yes critical:no - $CFDEM_USER_LIB_DIR = /home/ritwik/CFDEM/ritwik-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib
valid:yes critical:no - $CFDEM_USER_APP_DIR = /home/ritwik/CFDEM/ritwik-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/bin
valid:yes critical:no - $CFDEM_TEST_HARNESS_PATH = /home/ritwik/CFDEM/ritwik-PUBLIC-5.0/log/logFilesCFDEM-PUBLIC-5.0
valid:NO critical:no - $C3PO_SRC_DIR = does not exist

library names
$CFDEM_LIGGGHTS_LIB_NAME = lmp_fedora_fpic
$CFDEM_LIB_NAME = lagrangianCFDEM-PUBLIC-5.0
$LD_LIBRARY_PATH = /home/ritwik/CFDEM/ritwik-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib:/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib:/opt/ThirdParty-5.0/platforms/linux64Gcc/gperftools-svn/lib:/opt/paraviewopenfoam54/lib/paraview-5.4:/opt/openfoam5/platforms/linux64GccDPInt32Opt/lib/openmpi-system:/opt/ThirdParty-5.0/platforms/linux64GccDPInt32/lib/openmpi-system:/usr/lib/openmpi/lib:/home/ritwik/OpenFOAM/ritwik-5.0/platforms/linux64GccDPInt32Opt/lib:/opt/site/5.0/platforms/linux64GccDPInt32Opt/lib:/opt/openfoam5/platforms/linux64GccDPInt32Opt/lib:/opt/ThirdParty-5.0/platforms/linux64GccDPInt32/lib:/opt/openfoam5/platforms/linux64GccDPInt32Opt/lib/dummy
$WM_NCOMPPROCS =
$WM_LABEL_SIZE = 32

Additional lib settings
CFDEM_ADD_LIBS_DIR/CFDEM_ADD_LIBS_NAME = /home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/etc/addLibs_universal/additionalLibs_5.0
CFDEM_ADD_LIB_PATHS =
CFDEM_ADD_LIBS =

LIGGGHTS library link (created during compilation of CFDEM)
lrwxrwxrwx 1 ritwik ritwik 63 Jan 6 17:54 /home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib/liblmp_fedora_fpic.so -> /home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src/liblmp_fedora_fpic.so
*******************
g++:
/usr/bin/g++
g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

gcc:
/usr/bin/gcc
gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

mpic++:
/usr/bin/mpic++
g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

mpirun:
/usr/bin/mpirun
mpirun (Open MPI) 1.10.2

Report bugs to http://www.open-mpi.org/community/help/
**********************
additional packages...

/////////////////////////////////////////////////////////////////////////////////////////////////////////////////////

$ cfdemCompCFDEMall

copying patch files for LIGGGHTS if available
cp: cannot stat '/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/LIGGGHTSpatch/*': No such file or directory

===========================================
deactivating all possible packages of LIGGGHTS now...
Please provide the packages to be compiled in the //home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/etc/package-undo-liggghts-list.txt file.
Packages must be in: /home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src/../lib.
will change path...
/home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src
rm: cannot remove 'log_compilePOEMSlib': No such file or directory
Uninstalling package POEMS
will change path...
/home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src
rm: cannot remove 'log_compileDIPOLElib': No such file or directory
Package DIPOLE does not exist
will change path...
/home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src
rm: cannot remove 'log_compileASPHERElib': No such file or directory
Package ASPHERE does not exist
will change path...
/home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src
rm: cannot remove 'log_compilePASCALlib': No such file or directory
Uninstalling package PASCAL

===========================================
activating packages of LIGGGHTS now...
Please provide the packages to be compiled in the //home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/etc/package-liggghts-list.txt file.
Packages must be in: /home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src/../lib.

// log_compileLIGGGHTS-2018-01-07-13:48 //

/home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src

rm: cannot remove '/home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src/lmp_fedora_fpic': No such file or directory
rm -rf Obj_fedora_fpic MAKE/Makefile.fedora_fpic.options lmp_fedora_fpic liblmp_fedora_fpic.a liblmp_fedora_fpic.so
rm: cannot remove '/home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src/liblmp_fedora_fpic.a': No such file or directory
cleaning LIGGGHTS
compiling LIGGGHTS with
Makefile:106: recipe for target 'fedora_fpic' failed
make: *** [fedora_fpic] Error 1
Makefile.shlib:62: recipe for target 'fedora_fpic' failed
make: *** [fedora_fpic] Error 1

Thanks
Ritwik

alice's picture

alice | Mon, 01/08/2018 - 11:11

Hello Ritwik,

please set the variable CFDEM_LIGGGHTS_MAKEFILE_NAME to auto instead of fedora_foic in your ~/.bashrc.

Please also make sure that the LIGGGHTS repository is up to date as well.

Best,

Alice

Ritwik | Mon, 01/08/2018 - 11:55

Thanks Alice.

What is the procedure to update LIGGGHTS repository?

Thanks
Ritwik

medvedeg | Tue, 01/09/2018 - 15:40

Hi Ritwik,

git pull should help

Alexander Podlozhnyuk

Ritwik | Tue, 01/09/2018 - 18:24

Hi Alexander,

It's (git pull) not working.
git pull
fatal: Not a git repository (or any of the parent directories): .git

Thanks
Ritwik

Ritwik | Wed, 01/10/2018 - 13:17

Hi,

Please help me out for the following error during CFDEM coupling.

I have run following command (cfdemCompCFDEMall, cfdemCompLIG, cfdemCompCFDEMsrc, cfdemCompCFDEmsol, cfdenCompCFDEMuti) and check the message output.

$cfdemCompCFDEMall
.
.
.
.

running compilation in pseudo-parallel mode of 1 utilities
do compilation on 4 procs in 1 chunks
waiting...
compiling cfdemPostproc

// log_compileCFDEMcoupling_cfdemPostproc_cfdemPostproc-2018-01-10-11:04 //

/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/applications/utilities/cfdemPostproc

removing all .dep files ...
Making dependency list for source file cfdemPostproc.C
could not open file omp.h for source file cfdemPostproc.C due to No such file or directory
could not open file ompi/mpi/cxx/pmpicxx.h for source file cfdemPostproc.C due to No such file or directory
could not open file ompi/mpi/cxx/pop_inln.h for source file cfdemPostproc.C due to No such file or directory
could not open file ompi/mpi/cxx/pgroup_inln.h for source file cfdemPostproc.C due to No such file or directory
could not open file ompi/mpi/cxx/pstatus_inln.h for source file cfdemPostproc.C due to No such file or directory
could not open file ompi/mpi/cxx/prequest_inln.h for source file cfdemPostproc.C due to No such file or directory
could not open file math.h for source file cfdemPostproc.C due to No such file or directory
g++ -std=c++11 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -O3 -DNoRepository -ftemplate-depth-100 -DOMPI_SKIP_MPICXX -DSUPERQUADRIC_ACTIVE_FLAG -DNONSPHERICAL_ACTIVE_FLAG -DCFDEMWMPROJECTVERSION="50" -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent/include -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi -pthread -I/opt/openfoam5/src/TurbulenceModels/turbulenceModels/lnInclude -I/opt/openfoam5/src/TurbulenceModels/incompressible/lnInclude -I/opt/openfoam5/src/fvOptions/lnInclude -I/opt/openfoam5/src/transportModels -I/opt/openfoam5/src/transportModels/incompressible/singlePhaseTransportModel -I/opt/openfoam5/src/finiteVolume/lnInclude -I/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/lnInclude -I/opt/openfoam5/src/meshTools/lnInclude -I/home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src -IlnInclude -I. -I/opt/openfoam5/src/OpenFOAM/lnInclude -I/opt/openfoam5/src/OSspecific/POSIX/lnInclude -fPIC -c cfdemPostproc.C -o Make/linux64GccDPInt32Opt/cfdemPostproc.o
g++ -std=c++11 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -O3 -DNoRepository -ftemplate-depth-100 -DOMPI_SKIP_MPICXX -DSUPERQUADRIC_ACTIVE_FLAG -DNONSPHERICAL_ACTIVE_FLAG -DCFDEMWMPROJECTVERSION="50" -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent/include -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi -pthread -I/opt/openfoam5/src/TurbulenceModels/turbulenceModels/lnInclude -I/opt/openfoam5/src/TurbulenceModels/incompressible/lnInclude -I/opt/openfoam5/src/fvOptions/lnInclude -I/opt/openfoam5/src/transportModels -I/opt/openfoam5/src/transportModels/incompressible/singlePhaseTransportModel -I/opt/openfoam5/src/finiteVolume/lnInclude -I/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/lnInclude -I/opt/openfoam5/src/meshTools/lnInclude -I/home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src -IlnInclude -I. -I/opt/openfoam5/src/OpenFOAM/lnInclude -I/opt/openfoam5/src/OSspecific/POSIX/lnInclude -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPInt32Opt/cfdemPostproc.o -L/opt/openfoam5/platforms/linux64GccDPInt32Opt/lib \
-L/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib -lturbulenceModels -lincompressibleTurbulenceModels -lfvOptions -lincompressibleTransportModels -lfiniteVolume -llagrangianCFDEM-PUBLIC-5.0 -lOpenFOAM -ldl \
-lm -o /home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/bin/cfdemPostproc
waiting...
compilation done.
waiting...

$cfdemCompLIG
.
.
.
Compiling sub-libraries of LIGGGHTS now...
Please provide the libraries to be compiled in the //home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/etc/library-liggghts-list.txt file.
Libraries must be in: /home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src/../lib, or a path defined by the Line in the above file.

$cfdemCompCFDEMsrc

.
.
rm: cannot remove '/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/etc/log/log_compileCFDEMcoupling_fvOptionsCFDEM': No such file or directory

// log_compileCFDEMcoupling_fvOptionsCFDEM-2018-01-10-10:21 //

/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/eulerian/fvOptionsCFDEM

Compiling a incompressible library.
removing all .dep files ...
rm: cannot remove '/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/eulerian/fvOptionsCFDEM/Make/cfdemParticle': No such file or directory
wmake libso .
wmakeLnInclude: linking include files to ./lnInclude
Making dependency list for source file meanSupVelocityForce.C
g++ -std=c++11 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -O3 -DNoRepository -ftemplate-depth-100 -DOMPI_SKIP_MPICXX -DGITVERSION=\"3.8.0-3-gb237264\" -DDEBUGFLAG=\"\" -DCFDEMWMPROJECTVERSION="50" -DSUPERQUADRIC_ACTIVE_FLAG -DNONSPHERICAL_ACTIVE_FLAG -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent/include -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi -pthread -I/opt/openfoam5/src/finiteVolume/lnInclude -I/opt/openfoam5/src/meshTools/lnInclude -I/opt/openfoam5/src/sampling/lnInclude -I/opt/openfoam5/src/fvOptions/lnInclude -I/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/etc/OFversion -IlnInclude -I. -I/opt/openfoam5/src/OpenFOAM/lnInclude -I/opt/openfoam5/src/OSspecific/POSIX/lnInclude -fPIC -c sources/derived/meanSupVelocityForce/meanSupVelocityForce.C -o Make/linux64GccDPInt32Opt/sources/derived/meanSupVelocityForce/meanSupVelocityForce.o
g++ -std=c++11 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -O3 -DNoRepository -ftemplate-depth-100 -DOMPI_SKIP_MPICXX -DGITVERSION=\"3.8.0-3-gb237264\" -DDEBUGFLAG=\"\" -DCFDEMWMPROJECTVERSION="50" -DSUPERQUADRIC_ACTIVE_FLAG -DNONSPHERICAL_ACTIVE_FLAG -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent/include -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi -pthread -I/opt/openfoam5/src/finiteVolume/lnInclude -I/opt/openfoam5/src/meshTools/lnInclude -I/opt/openfoam5/src/sampling/lnInclude -I/opt/openfoam5/src/fvOptions/lnInclude -I/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/etc/OFversion -IlnInclude -I. -I/opt/openfoam5/src/OpenFOAM/lnInclude -I/opt/openfoam5/src/OSspecific/POSIX/lnInclude -fPIC -shared -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPInt32Opt/sources/derived/meanSupVelocityForce/meanSupVelocityForce.o -L/opt/openfoam5/platforms/linux64GccDPInt32Opt/lib \
-pthread -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags -L/usr/lib/openmpi/lib -lmpi -lfiniteVolume -lsampling -lmeshTools -lfvOptions -o /home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib/libfvOptionsCFDEM.so

$cfdemCompCFDEmsol

cfdemCompCFDEmsol: command not found

$cfdemCompCFDEMuti
.
.
.
.

// log_compileCFDEMcoupling_cfdemPostproc_cfdemPostproc-2018-01-10-12:12 //

/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/applications/utilities/cfdemPostproc

removing all .dep files ...
Making dependency list for source file cfdemPostproc.C
could not open file omp.h for source file cfdemPostproc.C due to No such file or directory
could not open file ompi/mpi/cxx/pmpicxx.h for source file cfdemPostproc.C due to No such file or directory
could not open file ompi/mpi/cxx/pop_inln.h for source file cfdemPostproc.C due to No such file or directory
could not open file ompi/mpi/cxx/pgroup_inln.h for source file cfdemPostproc.C due to No such file or directory
could not open file ompi/mpi/cxx/pstatus_inln.h for source file cfdemPostproc.C due to No such file or directory
could not open file ompi/mpi/cxx/prequest_inln.h for source file cfdemPostproc.C due to No such file or directory
could not open file math.h for source file cfdemPostproc.C due to No such file or directory
g++ -std=c++11 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -O3 -DNoRepository -ftemplate-depth-100 -DOMPI_SKIP_MPICXX -DSUPERQUADRIC_ACTIVE_FLAG -DNONSPHERICAL_ACTIVE_FLAG -DCFDEMWMPROJECTVERSION="50" -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent/include -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi -pthread -I/opt/openfoam5/src/TurbulenceModels/turbulenceModels/lnInclude -I/opt/openfoam5/src/TurbulenceModels/incompressible/lnInclude -I/opt/openfoam5/src/fvOptions/lnInclude -I/opt/openfoam5/src/transportModels -I/opt/openfoam5/src/transportModels/incompressible/singlePhaseTransportModel -I/opt/openfoam5/src/finiteVolume/lnInclude -I/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/lnInclude -I/opt/openfoam5/src/meshTools/lnInclude -I/home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src -IlnInclude -I. -I/opt/openfoam5/src/OpenFOAM/lnInclude -I/opt/openfoam5/src/OSspecific/POSIX/lnInclude -fPIC -c cfdemPostproc.C -o Make/linux64GccDPInt32Opt/cfdemPostproc.o
g++ -std=c++11 -m64 -Dlinux64 -DWM_ARCH_OPTION=64 -DWM_DP -DWM_LABEL_SIZE=32 -Wall -Wextra -Wold-style-cast -Wnon-virtual-dtor -Wno-unused-parameter -Wno-invalid-offsetof -O3 -DNoRepository -ftemplate-depth-100 -DOMPI_SKIP_MPICXX -DSUPERQUADRIC_ACTIVE_FLAG -DNONSPHERICAL_ACTIVE_FLAG -DCFDEMWMPROJECTVERSION="50" -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent -I/usr/lib/openmpi/include/openmpi/opal/mca/event/libevent2021/libevent/include -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi -pthread -I/opt/openfoam5/src/TurbulenceModels/turbulenceModels/lnInclude -I/opt/openfoam5/src/TurbulenceModels/incompressible/lnInclude -I/opt/openfoam5/src/fvOptions/lnInclude -I/opt/openfoam5/src/transportModels -I/opt/openfoam5/src/transportModels/incompressible/singlePhaseTransportModel -I/opt/openfoam5/src/finiteVolume/lnInclude -I/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/lnInclude -I/opt/openfoam5/src/meshTools/lnInclude -I/home/ritwik/LIGGGHTS/LIGGGHTS-PUBLIC/src -IlnInclude -I. -I/opt/openfoam5/src/OpenFOAM/lnInclude -I/opt/openfoam5/src/OSspecific/POSIX/lnInclude -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPInt32Opt/cfdemPostproc.o -L/opt/openfoam5/platforms/linux64GccDPInt32Opt/lib \
-L/home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib -lturbulenceModels -lincompressibleTurbulenceModels -lfvOptions -lincompressibleTransportModels -lfiniteVolume -llagrangianCFDEM-PUBLIC-5.0 -lOpenFOAM -ldl \
-lm -o /home/ritwik/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/bin/cfdemPostproc
waiting...
compilation done.
waiting...

Looking for reply.

Thanks
Ritwik

alice's picture

alice | Mon, 01/15/2018 - 07:11

Hi Ritwik,

have you tried running any tutorials? The "Could not open ..." messages are only preprocessor statements, that can be ignored... The remaining log does not seem to bad either.

Cheers,

Alice

Ritwik | Mon, 01/15/2018 - 13:02

Thanks Alice.

Yes, tutorials are running fine.

Thanks
Ritwik

Katharina | Wed, 01/10/2018 - 17:25

I have also a problem with the installation. While trying cfdemSysTest, I get the following:

cfdemSysTest

*********************************************
* C F D E M (R) c o u p l i n g *
* *
* by DCS Computing GmbH *
* www.dcs-computing.com *
*********************************************

*********************************
CFDEM(R)coupling system settings:
*********************************
CFDEM_VERSION=PUBLIC
couple to OF_VERSION=5.0
compile option=Opt

check if paths are set correctly
valid:yes critical:yes - $CFDEM_PROJECT_DIR = /home/hoehne/CFDEM/CFDEMcoupling-PUBLIC-5.0
valid:yes critical:no - $CFDEM_PROJECT_USER_DIR = /home/hoehne/CFDEM/hoehne-PUBLIC-5.0
valid:yes critical:yes - $CFDEM_SRC_DIR = /home/hoehne/CFDEM/CFDEMcoupling-PUBLIC-5.0/src
valid:yes critical:yes - $CFDEM_SOLVER_DIR = /home/hoehne/CFDEM/CFDEMcoupling-PUBLIC-5.0/applications/solvers
valid:yes critical:yes - $CFDEM_TUT_DIR = /home/hoehne/CFDEM/CFDEMcoupling-PUBLIC-5.0/tutorials
valid:yes critical:yes - $CFDEM_LIGGGHTS_SRC_DIR = /home/hoehne/LIGGGHTS/LIGGGHTS-PUBLIC/src
valid:yes critical:yes - $CFDEM_LIGGGHTS_LIB_PATH = /home/hoehne/LIGGGHTS/LIGGGHTS-PUBLIC/src
valid:yes critical:yes - $CFDEM_LPP_DIR = /home/hoehne/LIGGGHTS/lpp/src
valid:yes critical:yes - $CFDEM_ADD_LIBS_DIR = /home/hoehne/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/etc/addLibs_universal
valid:NO critical:yes - $CFDEM_LIB_DIR = /home/hoehne/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib does not exist
valid:NO critical:yes - $CFDEM_APP_DIR = /home/hoehne/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/bin does not exist
valid:yes critical:no - $CFDEM_USER_LIB_DIR = /home/hoehne/CFDEM/hoehne-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib
valid:yes critical:no - $CFDEM_USER_APP_DIR = /home/hoehne/CFDEM/hoehne-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/bin
valid:yes critical:no - $CFDEM_TEST_HARNESS_PATH = /home/hoehne/CFDEM/hoehne-PUBLIC-5.0/log/logFilesCFDEM-PUBLIC-5.0
valid:NO critical:no - $C3PO_SRC_DIR = does not exist

library names
$CFDEM_LIGGGHTS_LIB_NAME = lmp_auto
$CFDEM_LIB_NAME = lagrangianCFDEM-PUBLIC-5.0
$LD_LIBRARY_PATH = /home/hoehne/CFDEM/hoehne-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib:/home/hoehne/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib:/opt/ThirdParty-5.0/platforms/linux64Gcc/gperftools-svn/lib:/opt/paraviewopenfoam54/lib/paraview-5.4:/opt/openfoam5/platforms/linux64GccDPInt32Opt/lib/openmpi-system:/opt/ThirdParty-5.0/platforms/linux64GccDPInt32/lib/openmpi-system:/usr/lib/openmpi/lib:/home/hoehne/OpenFOAM/hoehne-5.0/platforms/linux64GccDPInt32Opt/lib:/opt/site/5.0/platforms/linux64GccDPInt32Opt/lib:/opt/openfoam5/platforms/linux64GccDPInt32Opt/lib:/opt/ThirdParty-5.0/platforms/linux64GccDPInt32/lib:/opt/openfoam5/platforms/linux64GccDPInt32Opt/lib/dummy
$WM_NCOMPPROCS = 4
$WM_LABEL_SIZE = 32

Additional lib settings
CFDEM_ADD_LIBS_DIR/CFDEM_ADD_LIBS_NAME = /home/hoehne/CFDEM/CFDEMcoupling-PUBLIC-5.0/src/lagrangian/cfdemParticle/etc/addLibs_universal/additionalLibs_5.x
CFDEM_ADD_LIB_PATHS =
CFDEM_ADD_LIBS =

LIGGGHTS library link (created during compilation of CFDEM)
ls: cannot access '/home/hoehne/CFDEM/CFDEMcoupling-PUBLIC-5.0/platforms/linux64GccDPInt32Opt/lib/liblmp*': No such file or directory
*******************
g++:
/usr/bin/g++
g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

gcc:
/usr/bin/gcc
gcc (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

mpic++:
/usr/bin/mpic++
g++ (Ubuntu 5.4.0-6ubuntu1~16.04.5) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

mpirun:
/usr/bin/mpirun
mpirun (Open MPI) 1.10.2

Report bugs to http://www.open-mpi.org/community/help/
**********************
additional packages...

So, the path ... /platforms/... is not there and I don't see it in the original folder in github. What is wrong?

alice's picture

alice | Mon, 01/15/2018 - 07:09

Hi Katharina,

have you tried starting the installation (cfdemCompCFDEMall)? Since the platforms folder is created during the installation this check has to fail before the installation (sorry for this confiusion, I know the message indicates otherwise, I'll pass that info on).

Best,

Alice

mattheuw ma | Sun, 01/28/2018 - 17:13

Hi Alice,
Please Help me.
I have compiled and installed vtk-6.3 in my own directory. There were no errors in installation of VTK. I compiled LIGGGHTS with cfdemCompLIG command and the compilation went well except for some "cannot open..." messages. But when i run cfdemLiggghts for testing if LIGGGHTS compiled properly, the following error coming:

/home/martheuw/LIGGGHTS/LIGGGHTS-PUBLIC/src/lmp_auto: error while loading shared libraries: libvtkzlib-6.3.so.1: cannot open shared object file: No such file or directory

Before I processed the cfdemComLIG command, i configured the VTK_INC_USR and VTK_LIB_USR with my VTK installation path and i'm sure that the libvtkzlib-6.3.so.1 is in the VTK installation directory.

Please help me, thank you
mattheuw

j-kerbl's picture

j-kerbl | Mon, 01/29/2018 - 11:15

Hi Mattheuw,

have you added the path to the VTK libraries to your LD_LIBRARY_PATH?
If you installed it to a non-standard location, you'll need to tell the environment where to find the libraries.
You can check with "echo $LD_LIBRARY_PATH | grep -i 'vtk'"
In case you haven't yet, please add this to your .bashrc (if you use bash):

export LD_LIBRARY_PATH=<PATH TO VTK LIBS>:$LD_LIBRARY_PATH

Cheers,
Josef

tooran | Thu, 01/10/2019 - 03:40

I tried to install the CFDEM couplin via https://www.cfdem.com/media/CFDEM/docu/CFDEMcoupling_Manual.html#install-1.
I faced the problem , when I run cfdsysTest following message coming :

~$ cfdemSysTest

*********************************************
* C F D E M (R) c o u p l i n g *
* *
* by DCS Computing GmbH *
* www.dcs-computing.com *
*********************************************

*********************************
CFDEM(R)coupling system settings:
*********************************
CFDEM_VERSION=PUBLIC
couple to OF_VERSION=
compile option=

check if paths are set correctly
valid:yes critical:yes - $CFDEM_PROJECT_DIR = /home/tooran/CFDEM/CFDEMcoupling-PUBLIC-
valid:yes critical:no - $CFDEM_PROJECT_USER_DIR = /home/tooran/CFDEM/tooran-PUBLIC-
valid:yes critical:yes - $CFDEM_SRC_DIR = /home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/src
valid:yes critical:yes - $CFDEM_SOLVER_DIR = /home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/applications/solvers
valid:yes critical:yes - $CFDEM_TUT_DIR = /home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/tutorials
valid:yes critical:yes - $CFDEM_LIGGGHTS_SRC_DIR = /home/tooran/LIGGGHTS/LIGGGHTS-PUBLIC/src
valid:yes critical:yes - $CFDEM_LIGGGHTS_LIB_PATH = /home/tooran/LIGGGHTS/LIGGGHTS-PUBLIC/src
valid:NO critical:yes - $CFDEM_LPP_DIR = /home/tooran/LIGGGHTS/mylpp/src does not exist
valid:yes critical:yes - $CFDEM_ADD_LIBS_DIR = /home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/src/lagrangian/cfdemParticle/etc/addLibs_universal
valid:yes critical:yes - $CFDEM_LIB_DIR = /home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib
valid:yes critical:yes - $CFDEM_APP_DIR = /home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//bin
valid:yes critical:no - $CFDEM_USER_LIB_DIR = /home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib
valid:yes critical:no - $CFDEM_USER_APP_DIR = /home/tooran/CFDEM/tooran-PUBLIC-/platforms//bin
valid:yes critical:no - $CFDEM_TEST_HARNESS_PATH = /home/tooran/CFDEM/tooran-PUBLIC-/log/logFilesCFDEM-PUBLIC-
valid:NO critical:no - $C3PO_SRC_DIR = does not exist

library names
$CFDEM_LIGGGHTS_LIB_NAME = lmp_fedora_fpic
$CFDEM_LIB_NAME = lagrangianCFDEM-PUBLIC-
$LD_LIBRARY_PATH = /home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:/home/tooran/CFDEM/tooran-PUBLIC-/platforms//lib:/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib:
$WM_NCOMPPROCS =
$WM_LABEL_SIZE =
/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/src/lagrangian/cfdemParticle/etc/cfdemSystemTest.sh: line 54: [: !=: unary operator expected

Additional lib settings
CFDEM_ADD_LIBS_DIR/CFDEM_ADD_LIBS_NAME = /home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/src/lagrangian/cfdemParticle/etc/addLibs_universal/additionalLibs_
.Makefile_vtk_tmp:1: /home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/src/lagrangian/cfdemParticle/etc/addLibs_universal/additionalLibs_: No such file or directory
make: *** No rule to make target '/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/src/lagrangian/cfdemParticle/etc/addLibs_universal/additionalLibs_'. Stop.

LIGGGHTS library link (created during compilation of CFDEM)
ls: cannot access '/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/platforms//lib/liblmp*': No such file or directory
*******************
g++:
/usr/bin/g++
g++ (Ubuntu 5.4.0-6ubuntu1~16.04.11) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

gcc:
/usr/bin/gcc
gcc (Ubuntu 5.4.0-6ubuntu1~16.04.11) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

mpic++:
/usr/bin/mpic++
g++ (Ubuntu 5.4.0-6ubuntu1~16.04.11) 5.4.0 20160609
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

mpirun:
/usr/bin/mpirun
mpirun (Open MPI) 1.10.2

Report bugs to http://www.open-mpi.org/community/help/
**********************
additional packages...

$cfdemCompLIG
copying patch files for LIGGGHTS if available
cp: cannot stat '/home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/src/LIGGGHTSpatch/*': No such file or directory

===========================================
deactivating all possible packages of LIGGGHTS now...
Please provide the packages to be compiled in the //home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/src/lagrangian/cfdemParticle/etc/package-undo-liggghts-list.txt file.
Packages must be in: /home/tooran/LIGGGHTS/LIGGGHTS-PUBLIC/src/../lib.
will change path...
/home/tooran/LIGGGHTS/LIGGGHTS-PUBLIC/src
rm: cannot remove 'log_compilePOEMSlib': No such file or directory
Uninstalling package POEMS
will change path...
/home/tooran/LIGGGHTS/LIGGGHTS-PUBLIC/src
rm: cannot remove 'log_compileDIPOLElib': No such file or directory
Package DIPOLE does not exist
will change path...
/home/tooran/LIGGGHTS/LIGGGHTS-PUBLIC/src
rm: cannot remove 'log_compileASPHERElib': No such file or directory
Package ASPHERE does not exist
will change path...
/home/tooran/LIGGGHTS/LIGGGHTS-PUBLIC/src
rm: cannot remove 'log_compilePASCALlib': No such file or directory
Uninstalling package PASCAL

===========================================
activating packages of LIGGGHTS now...
Please provide the packages to be compiled in the //home/tooran/CFDEM/CFDEMcoupling-PUBLIC-/src/lagrangian/cfdemParticle/etc/package-liggghts-list.txt file.
Packages must be in: /home/tooran/LIGGGHTS/LIGGGHTS-PUBLIC/src/../lib.

// log_compileLIGGGHTS-2019-01-09-21:10 //

/home/tooran/LIGGGHTS/LIGGGHTS-PUBLIC/src

rm: cannot remove '/home/tooran/LIGGGHTS/LIGGGHTS-PUBLIC/src/lmp_fedora_fpic': No such file or directory
rm -rf Obj_fedora_fpic MAKE/Makefile.fedora_fpic.options lmp_fedora_fpic liblmp_fedora_fpic.a liblmp_fedora_fpic.so
rm: cannot remove '/home/tooran/LIGGGHTS/LIGGGHTS-PUBLIC/src/liblmp_fedora_fpic.a': No such file or directory
cleaning LIGGGHTS
compiling LIGGGHTS with
Makefile:106: recipe for target 'fedora_fpic' failed
make: *** [fedora_fpic] Error 1
Makefile.shlib:62: recipe for target 'fedora_fpic' failed
make: *** [fedora_fpic] Error 1

Could you please help me?