Problems with compilation

Hi Josef,

Thanks for the help. I compiled OpenFOAM myself following this guide http://openfoamwiki.net/index.php/Installation/Linux/OpenFOAM-2.3.0/Ubun... . I just replaced the '2.3.0' for '2.3.x' and everything worked like a charm.

So far, OpenFOAM's worked perfectly so it seems than that installation went well. Still no luck when I try to install LIGGGHTS/CFDEM.

Best regards,

Hi Andreas,

I checked what you told me and it results that I hadn't included the bashrc from OpenFOAM correctly to my .bashrc so I fixed it and recompiled everything. Then again, I found the same problems

I notice that when I'm compiling LIGGGHTS, the following message appears frequently referring to the "fix_rigid.h" file.

mpic++ -O2 -funroll-loops -fstrict-aliasing -Wall -W -Wno-uninitialized -DLAMMPS_GZIP -DFFT_FFTW3 -M ../compute_erotate_sphere.cpp > compute_erotate_sphere.d
In file included from ../fix_multisphere.h:1:0,
from ../compute_erotate_sphere.cpp:32:
../fix_dummy.h:4:23: fatal error: fix_rigid.h: No existe el archivo o el directorio (this means: "The file or the directory doesn't exist)
#include "fix_rigid.h"
^
compilation terminated.
mpic++ -O2 -funroll-loops -fstrict-aliasing -Wall -W -Wno-uninitialized -DLAMMPS_GZIP -DFFT_FFTW3 -M ../compute_erotate_sphere_atom.cpp > compute_erotate_sphere_atom.d
In file included from ../fix_multisphere.h:1:0,
from ../compute_erotate_sphere_atom.cpp:32:
../fix_dummy.h:4:23: fatal error: fix_rigid.h: No existe el archivo o el directorio (this means: "The file or the directory doesn't exist)
#include "fix_rigid.h"
^
compilation terminated.
mpic++ -O2 -funroll-loops -fstrict-aliasing -Wall -W -Wno-uninitialized -DLAMMPS_GZIP -DFFT_FFTW3 -M ../compute_displace_atom.cpp > compute_displace_atom.d

Then, when I'm compiling CFDEM (through cfdemCompCFDEM) the following line appears frequently at the beginning

could not open file RASModel.H for source file subModels/clockModel/clockModel/newClockModel.C due to No such file or directory

It finishes again with problems in cfdemPostproc.

g++ -m64 -Dlinux64 -DWM_DP -Wall -Wextra -Wno-unused-parameter -Wold-style-cast -Wnon-virtual-dtor -O3 -DNoRepository -ftemplate-depth-100 -I/home/agustin/OpenFOAM/OpenFOAM-2.3.x/src/turbulenceModels/incompressible/turbulenceModel -I/home/agustin/OpenFOAM/OpenFOAM-2.3.x/src/transportModels -I/home/agustin/OpenFOAM/OpenFOAM-2.3.x/src/transportModels/incompressible/singlePhaseTransportModel -I/home/agustin/OpenFOAM/OpenFOAM-2.3.x/src/finiteVolume/lnInclude -I/home/agustin/CFDEM/CFDEMcoupling-PUBLIC-2.3.x/src/lagrangian/cfdemParticle/lnInclude -I/home/agustin/OpenFOAM/OpenFOAM-2.3.x/src/meshTools/lnInclude -IlnInclude -I. -I/home/agustin/OpenFOAM/OpenFOAM-2.3.x/src/OpenFOAM/lnInclude -I/home/agustin/OpenFOAM/OpenFOAM-2.3.x/src/OSspecific/POSIX/lnInclude -fPIC -Xlinker --add-needed -Xlinker --no-as-needed Make/linux64GccDPOpt/cfdemPostproc.o -L/home/agustin/OpenFOAM/OpenFOAM-2.3.x/platforms/linux64GccDPOpt/lib \
-L/home/agustin/OpenFOAM/OpenFOAM-2.3.x/platforms/linux64GccDPOpt/lib -lincompressibleRASModels -lincompressibleLESModels -lincompressibleTransportModels -lfiniteVolume -llagrangianCFDEM-PUBLIC-2.3.x -lOpenFOAM -ldl -lm -o /home/agustin/OpenFOAM/OpenFOAM-2.3.x/platforms/linux64GccDPOpt/bin/cfdemPostproc
/usr/bin/ld: no se puede encontrar -llagrangianCFDEM-PUBLIC-2.3.x
collect2: error: ld returned 1 exit status
make: *** [/home/agustin/OpenFOAM/OpenFOAM-2.3.x/platforms/linux64GccDPOpt/bin/cfdemPostproc] Error 1

My current cfdemSysTest output it's the following

cfdemSysTest
*******************
system settings:
*******************
CFDEM_VERSION=PUBLIC
couple to OF_VERSION=2.3.x
compile option=Opt

check if paths are set correctly
valid:yes critical:yes - $CFDEM_PROJECT_DIR = /home/agustin/CFDEM/CFDEMcoupling-PUBLIC-2.3.x
valid:yes critical:no - $CFDEM_PROJECT_USER_DIR = /home/agustin/CFDEM/agustin-PUBLIC-2.3.x
valid:yes critical:yes - $CFDEM_SRC_DIR = /home/agustin/CFDEM/CFDEMcoupling-PUBLIC-2.3.x/src
valid:yes critical:yes - $CFDEM_SOLVER_DIR = /home/agustin/CFDEM/CFDEMcoupling-PUBLIC-2.3.x/applications/solvers
valid:yes critical:yes - $CFDEM_TUT_DIR = /home/agustin/CFDEM/CFDEMcoupling-PUBLIC-2.3.x/tutorials
valid:yes critical:yes - $CFDEM_LIGGGHTS_SRC_DIR = /home/agustin/LIGGGHTS/LIGGGHTS-PUBLIC/src
valid:yes critical:yes - $CFDEM_LPP_DIR = /home/agustin/LIGGGHTS/mylpp/src
valid:yes critical:no - $CFDEM_PIZZA_DIR = /home/agustin/LIGGGHTS/PIZZA/gran_pizza_17Aug10/src
valid:NO critical:no - $CFDEM_TEST_HARNESS_PATH = /home/agustin/CFDEM/agustin-PUBLIC-2.3.x/log/logFilesCFDEM-PUBLIC-2.3.x does not exist

library names
$CFDEM_LIGGGHTS_LIB_NAME = lmp_openmpi
$CFDEM_LIB_NAME = lagrangianCFDEM-PUBLIC-2.3.x
$LD_LIBRARY_PATH = /home/agustin/OpenFOAM/ThirdParty-2.3.x/platforms/linux64Gcc/CGAL-4.3/lib:/home/agustin/OpenFOAM/ThirdParty-2.3.x/platforms/linux64Gcc/gperftools-svn/lib:/home/agustin/OpenFOAM/ThirdParty-2.3.x/platforms/linux64Gcc/ParaView-4.1.0/lib/paraview-4.1:/home/agustin/OpenFOAM/OpenFOAM-2.3.x/platforms/linux64GccDPOpt/lib/openmpi-system:/home/agustin/OpenFOAM/ThirdParty-2.3.x/platforms/linux64GccDPOpt/lib/openmpi-system:/usr/lib/openmpi/lib:/home/agustin/OpenFOAM/agustin-2.3.x/platforms/linux64GccDPOpt/lib:/home/agustin/OpenFOAM/site/2.3.x/platforms/linux64GccDPOpt/lib:/home/agustin/OpenFOAM/OpenFOAM-2.3.x/platforms/linux64GccDPOpt/lib:/home/agustin/OpenFOAM/ThirdParty-2.3.x/platforms/linux64GccDPOpt/lib:/home/agustin/OpenFOAM/OpenFOAM-2.3.x/platforms/linux64GccDPOpt/lib/dummy
$WM_NCOMPPROCS =
*******************
g++:
/usr/bin/g++
g++ (Ubuntu 4.8.2-19ubuntu1) 4.8.2
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

gcc:
/usr/bin/gcc
gcc (Ubuntu 4.8.2-19ubuntu1) 4.8.2
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

mpic++:
/usr/bin/mpic++
g++ (Ubuntu 4.8.2-19ubuntu1) 4.8.2
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

mpirun:
/home/agustin/OpenFOAM/OpenFOAM-2.3.x/bin/mpirun
mpirun (Open MPI) 1.6.5

I'd appreciate any ideas to fix this. Thank you for the help so far!

Best regards,

Agustin

It seems that it finally worked!

In my log file appead a new file log_compile_results_success that never appeared before and now, when I type cfdemTestTUT I finally get some results instead of warnings.

If anyone happens to have my same problems, what I did was delete both folders with CFDEM and LIGGGHTS and started everything once again. While I was experimenting trying to make the compilation work, I changed a few thing that might've produced some errors, I fooled around changing export CFDEM_LIGGGHTS_MAKEFILE_NAME=fedora_fpic in the bash to openmpi, UbuntuVTK or whatever.

When I recompiled everything I kept that in fedora_fpic and compiled directly from the LIGGGHTS ' src. Then I found that no warnings appeared so I moved to the cfdemCompLIG . I did a make clear-all and when I recompiled, the problem with the missing files appeared again. I removed the folder once again and recompiled and it was fixed. I then compiled again through the coupling and everything's been working so far. So..I'm not quite sure what happened, but that's what triggered the succesful compilation and fixed the 'missing files'

Still a few odd warnings appear as the tutorial works but since I'm getting results, it seems that they're not important.

Thanks for the help guys!