hey guys, i have a similar problem.
Im trying to simulate an underwater slope with a given volume fraction. First I try to generate a normal box of particles and the delete the particles to generate the slope with a restart file.
this is my input data:
#Unterwasserboeschung
atom_style	granular
atom_modify	map array
boundary	f f f
newton		off
communicate single vel yes
units		si
processors      2 2 1
region		raum block  0 3 0.0 0.02 0.0 1 units box
region		gesamt block  0 2 0.0 0.02 0.0 0.7 units box #Gesamte partikel in Rechteckform
create_box	1 raum
neighbor	0.002 bin
neigh_modify	delay 0
#Material properties required for new pair styles
fix 		m1 all property/global youngsModulus peratomtype 5.e6
fix 		m2 all property/global poissonsRatio peratomtype 0.45
fix 		m3 all property/global coefficientRestitution peratomtypepair 1 0.3
fix 		m4 all property/global coefficientFriction peratomtypepair 1 0.47
#fix 		m5 all property/global k_finnie peratomtypepair 1 1.0
fix         	m5 all property/global coefficientRollingFriction peratomtypepair 1 0.01
#New pair style
pair_style gran model hertz tangential history rolling_friction epsd2 #Hertzian without cohesion
pair_coeff	* *
timestep 0.00001
fix gravi all gravity 9.81 vector 0.0 0.0 -1.0
fix 		xwalls1 all wall/gran model hertz tangential history primitive type 1 xplane 0
fix 		xwalls2 all wall/gran model hertz tangential history primitive type 1 xplane 1
fix 		ywalls1 all wall/gran model hertz tangential history primitive type 1 yplane 0
fix 		ywalls2 all wall/gran model hertz tangential history primitive type 1 yplane 0.02
fix 		zwalls1 all wall/gran model hertz tangential history primitive type 1 zplane 0
fix 		zwalls2 all wall/gran model hertz tangential history primitive type 1 zplane 1
#distributions for insertion
fix		pts1 all particletemplate/sphere 1 atom_type 1 density constant 2500 radius constant 0.001
fix		pdd1 all particledistribution/discrete 1.  1 pts1 1
#parameters for gradually growing particle diameter
variable	alphastart equal 0.4
variable	alphatarget equal 0.63
variable	growts equal 50000
variable	growevery equal 40
variable	relaxts equal 30000
#region and insertion
group		all region gesamt
#region		bc block 0 1 0.0 0.02 0.0 0.7 units box 
#particle insertion
fix			ins all insert/pack seed 5330 distributiontemplate pdd1 insert_every once overlapcheck yes all_in yes vel constant 0. 0. 0. region gesamt volumefraction_region ${alphastart}
#apply nve integration to all particles that are inserted as single particles
fix		integr all nve/sphere
#output settings, include total thermal energy
compute		1 all erotate/sphere
thermo_style	custom step atoms ke c_1 vol
thermo		1000
thermo_modify	lost ignore norm no
compute_modify	thermo_temp dynamic yes
#insert the first particles so that dump is not empty
run		1
dump		dmp all custom/vtk 2500 post/dump*.vtk id type type x y z ix iy iz vx vy vz fx fy fz omegax omegay omegaz radius 
#calculate grow rate
variable	Rgrowrate equal (${alphatarget}/${alphastart})^(${growevery}/(3.*${growts}))
print		"The radius grow rate is ${Rgrowrate}"
#do the diameter grow
compute 	rad all property/atom radius
variable	dgrown atom ${Rgrowrate}*2.*c_rad
fix		grow all adapt ${growevery} atom diameter v_dgrown
#run
run		${growts}
#let the packing relax
unfix	grow
run		${relaxts}
my main problem is, that after the particles are generated they first start to settle  down and then start to increase their radius.
afterwards there are way higher volume fraction than i wanted to have. (my original insertion region heights is 0.7m and after the growth it is only 0.4m.)
When generating my particles, it also says that there are less particles inserted than requested. 
I hope somebody can help me and understands my problem.
best regards,
Christian
