Facing Problem During the Run

Submitted by Yeasir Mohammad Akib on Sat, 06/18/2022 - 06:22

Hello,

I am facing the following problem when trying to run the Ligghts.

""
LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2022-06-13-16:05:55 by slm_lab_utrgv, git commit 86544c3f1215bc9744d7929e3eacf53ba086af9e)
Created orthogonal box = (-2.55 -2.55 -0.05) to (2.55 2.55 5)
2 by 2 by 1 MPI processor grid
ERROR on proc 0: Cannot open mesh file silo.stl (../input_mesh_tri.cpp:105)
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD
with errorcode 1.

NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.
--------------------------------------------------------------------------

SIGINT/SIGTERM caught - Writing restart on next occasion and quitting after that.

SIGINT/SIGTERM caught - Writing restart on next occasion and quitting after that.

SIGINT/SIGTERM caught - Writing restart on next occasion and quitting after that.

""
May I know what is the problem? Thank you.

Regards,
Yeasir Mohammad Akib
MS Student
University of Texas Rio Grande Valley

Yeasir Mohammad Akib | Sat, 06/18/2022 - 07:21

LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2022-06-13-16:05:55 by slm_lab_utrgv, git commit 86544c3f1215bc9744d7929e3eacf53ba086af9e)
Created orthogonal box = (-2.55 -2.55 -0.05) to (2.55 2.55 5)
2 by 2 by 1 MPI processor grid

Reading STL file 'meshes/Silo.stl' (mesh processing step 1/3)

Reading STL file 'meshes/Lid.stl' (mesh processing step 1/3)

Reading STL file 'meshes/Ground.stl' (mesh processing step 1/3)

Reading STL file 'meshes/Frame.stl' (mesh processing step 1/3)
ERROR on proc 3: Substitution for illegal variable (../input.cpp:505)
��0V (../input.cpp:505)
ERROR on proc 0: Substitution for illegal variable (../input.cpp:505)
ERROR on proc 1: Substitution for illegal variable (../input.cpp:505)
�&���U (../input.cpp:505)
ERROR on proc 2: Substitution for illegal variable (../input.cpp:505)
�D-�V (../input.cpp:505)
���@�U (../input.cpp:505)
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 3 in communicator MPI_COMM_WORLD
with errorcode 1.

NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.
--------------------------------------------------------------------------
[slm-lab-utrgv-VirtualBox:49246] 3 more processes have sent help message help-mpi-api.txt / mpi-abort

What should I do know?

Yeasir Mohammad Akib | Sat, 06/18/2022 - 09:53

"""LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2022-06-13-16:05:55 by slm_lab_utrgv, git commit 86544c3f1215bc9744d7929e3eacf53ba086af9e)
Created orthogonal box = (-2.55 -2.55 -0.05) to (2.55 2.55 5)
2 by 2 by 1 MPI processor grid

Reading STL file 'meshes/silo.stl' (mesh processing step 1/3)

Reading STL file 'meshes/lid.stl' (mesh processing step 1/3)

Reading STL file 'meshes/ground.stl' (mesh processing step 1/3)

Reading STL file 'meshes/frame.stl' (mesh processing step 1/3)
Fix particledistribution/discrete (id pdd1): distribution based on mass%:
pts1: d=4.000000e-02 (max. bounding sphere) mass%=20.000000%
pts2: d=6.000000e-02 (max. bounding sphere) mass%=80.000000%
Fix particledistribution/discrete (id pdd1): distribution based on number%:
pts1: d=4.000000e-02 (max. bounding sphere) number%=45.762712%
pts2: d=6.000000e-02 (max. bounding sphere) number%=54.237288%

Reading STL file 'meshes/inserSurface.stl' (mesh processing step 1/3)
Setting up run at Sat Jun 18 02:52:36 2022

Import and parallelization of mesh silo containing 283 triangle(s) successful
Import and parallelization of mesh lid containing 48 triangle(s) successful
Import and parallelization of mesh ground containing 2 triangle(s) successful
Import and parallelization of mesh frame containing 48 triangle(s) successful
Import and parallelization of mesh ins_mesh containing 62 triangle(s) successful
ERROR: Fix insert/stream (id ins): insertion velocity projected on face normal is < 1e-3 (../fix_insert_stream.cpp:330)
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun detected that one or more processes exited with non-zero status, thus causing
the job to be terminated. The first process to do so was:

Process name: [[13152,1],2]
Exit code: 1
--------------------------------------------------------------------------
"""
Can anyone please check?