Hello,
I am receiving the following error when running the hopper drain example from the website.
mschramm@da200b-04 ~/Documents/liggghts/examples/LIGGGHTS/Tutorials_public/Bin_Sim
$ Liggghts<HopDrain_Bonds.txt
LIGGGHTS (Version LIGGGHTS-PUBLIC 3.3.0, compiled 2015-12-11-19:39:06 by mschramm, git commit 9b1fc57b77c483deaf2c0a6c69241c5d4f91e3c2 based on LAMMPS 23 Nov 2013)
ERROR: Invalid atom style (../atom.cpp:432)
I have been able to run the example using atom_style sphere but I now want to add a bond between two particles.
When I type [Liggghts -h] and go to the Atom styles section it lists
* Atom styles:
atomic charge ellipsoid hybrid line
sph sph/var sphere granular
but if I go into the src folder and type [make package-status] it lists that I have the package installed
mschramm@da200b-04 ~/Documents/liggghts/src
$ make package-status
Installed YES: package ASPHERE
Package.sh: line 7: cd: COHESIONMODELS: No such file or directory
Installed NO: package COHESIONMODELS
Installed YES: package MOLECULE
Installed YES: package PASCAL
Installed YES: package POEMS
Installed YES: package RIGID
Package.sh: line 7: cd: SURFACEMODELS: No such file or directory
Installed NO: package SURFACEMODELS
Installed YES: package VORONOI
Does anyone have any idea where I made my mistake?
As for the mpirun error
I have made Liggghts my alliace for lmp_fedora
alias Liggghts=/home/mschramm/Documents/liggghts/src/lmp_fedora
and if I only use Liggghts<"My_Sim", it works and runs, but mpirun Liggghts<"My_Sim" does not. The funny thing is,
mpirun /home/mschramm/Documents/liggghts/src/lmp_fedora<"My_Sim" works just fine. Am I missing something?
Thank you for your time.
mschramm | Fri, 12/18/2015 - 18:44
Found my problem. Asphere was
Found my problem. Asphere was presenting me issues. The package was wanting files .cpp and .h files that were not supplied with the liggghts package from github (atom_vec_tri).
As for my other problem, I substituted
alias Liggghts=/home/mschramm/Documents/liggghts/src/lmp_fedora
with
Liggghts=/home/mschramm/Documents/liggghts/src/lmp_fedora
export Liggghts
and start either a serial run or an mpi run with
Serial --> $Liggghts<"My_File"
MPI --> mpirun -np 4 $Liggghts<"My_File"
This made everything work just fine.