Error when compiling CFDEM

Hi,

I am a new user of CFDEM. I use Linux Mint 17.3. To install CFDEM, I first installed OpenFOAM as recommended using git, and then followed to install LIGGGHTS and CFDEM. However, some errors show up as below when I complied CFDEM. Apparently, it seems "CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev" does not exist. But what I have in that directory is
additionalLibs_2.4.x
additionalLibs_3.0.x
additionalLibs_3.2

#################################################################################################
[xiay][~]> cfdemCompCFDEM

Compiling sub-libraries of LIGGGHTS now...
Please provide the libraries to be compiled in the //home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/library-liggghts-list.txt file.
Libraries must be in: /home/xiay/LIGGGHTS/LIGGGHTS-PUBLIC/src/../lib/, or a path defined by the Line in the above file.
...now checking if LIGGGHTS libraries are compiled that are needed for CFDEM's src packages.

Please provide the libraries to be compiled in the /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/library-list.txt file.
will change path and create lnInclude...
will change path and create lnInclude...

\n Creation of lnInclude directories finished!

will change path...
rm: cannot remove ‘/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/log/log_compileCFDEMcoupling_cfdemParticle’: No such file or directory

// log_compileCFDEMcoupling_cfdemParticle-2016-07-27-09:29 //

/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle

Compiling a incompressible library.
removing all .dep files ...
Make/linux64GccDPInt32Opt/options:60: /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev: No such file or directory
make: *** No rule to make target `/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev'. Stop.
Make/linux64GccDPInt32Opt/options:60: /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev: No such file or directory
make: *** No rule to make target `/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev'. Stop.
wmake error: file 'Make/linux64GccDPInt32Opt/sourceFiles' could not be created in /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle
will change path...
rm: cannot remove ‘/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/log/log_compileCFDEMcoupling_scalarTransportModelsCFDEM’: No such file or directory

// log_compileCFDEMcoupling_scalarTransportModelsCFDEM-2016-07-27-09:29 //

/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/eulerian/scalarTransportModelsCFDEM

Compiling a incompressible library.
removing all .dep files ...
Make/options:21:12: warning: backslash-newline at end of file [enabled by default]
LIB_LIBS = \
^
Make/linux64GccDPInt32Opt/options:60: /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev: No such file or directory
make: *** No rule to make target `/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev'. Stop.
Make/linux64GccDPInt32Opt/options:60: /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev: No such file or directory
make: *** No rule to make target `/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev'. Stop.
wmake error: file 'Make/linux64GccDPInt32Opt/sourceFiles' could not be created in /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/eulerian/scalarTransportModelsCFDEM
rm: cannot remove ‘log/log_compile_results_success’: No such file or directory

This routine will compile the solvers specified in solver-list.txt

Please provide the solvers to be compiled in the /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/solver-list.txt file.
structure:
path to provide the path relative to CFDEM_SOLVER_DIR

example:
cfdemSolverPiso/dir

running compilation in pseudo-parallel mode of 4 solvers
do compilation in serial
waiting...
compiling cfdemSolverPiso

// log_compileCFDEMcoupling_cfdemSolverPiso_cfdemSolverPiso-2016-07-27-09:29 //

/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/applications/solvers/cfdemSolverPiso

// log_compileCFDEMcoupling_cfdemSolverIB_cfdemSolverIB-2016-07-27-09:29 //

/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/applications/solvers/cfdemSolverIB

// log_compileCFDEMcoupling_cfdemSolverPisoScalar_cfdemSolverPisoScalar-2016-07-27-09:29 //

/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/applications/solvers/cfdemSolverPisoScalar

// log_compileCFDEMcoupling_cfdemSolverPisoSTM_cfdemSolverPisoSTM-2016-07-27-09:29 //

/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/applications/solvers/cfdemSolverPisoSTM

removing all .dep files ...
Make/linux64GccDPInt32Opt/options:52: /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev: No such file or directory
make: *** No rule to make target `/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev'. Stop.
Make/linux64GccDPInt32Opt/options:52: /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev: No such file or directory
make: *** No rule to make target `/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev'. Stop.
wmake error: file 'Make/linux64GccDPInt32Opt/sourceFiles' could not be created in /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/applications/solvers/cfdemSolverPisoSTM
waiting...
compilation done.
waiting...
collecting log of /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/applications/solvers/cfdemSolverPiso
collecting log of /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/applications/solvers/cfdemSolverIB
collecting log of /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/applications/solvers/cfdemSolverPisoScalar
collecting log of /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/applications/solvers/cfdemSolverPisoSTM

This routine will compile the utilities specified in utilities-list.txt

Please provide the utilities to be compiled in the /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/utilities-list.txt file.
structure:
path to provide the path relative to CFDEM_UT_DIR

example:
cfdemPostproc/dir

running compilation in pseudo-parallel mode of 1 utilities
do compilation in serial
waiting...

// log_compileCFDEMcoupling_cfdemPostproc_cfdemPostproc-2016-07-27-09:29 //

/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/applications/utilities/cfdemPostproc

removing all .dep files ...
Make/linux64GccDPInt32Opt/options:52: /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev: No such file or directory
make: *** No rule to make target `/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev'. Stop.
Make/linux64GccDPInt32Opt/options:52: /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev: No such file or directory
make: *** No rule to make target `/home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc/additionalLibs_dev'. Stop.
wmake error: file 'Make/linux64GccDPInt32Opt/sourceFiles' could not be created in /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/applications/utilities/cfdemPostproc
waiting...
compilation done.
#################################################################################################

To help resolve my issue, I've pasted the system information test as below:

#################################################################################################
[xiay][~]> cfdemSysTest

*********************************************
* C F D E M (R) c o u p l i n g *
* *
* by DCS Computing GmbH *
* www.dcs-computing.com *
*********************************************

*********************************
CFDEM(R)coupling system settings:
*********************************
CFDEM_VERSION=PUBLIC
couple to OF_VERSION=dev
compile option=Opt

check if paths are set correctly
valid:yes critical:yes - $CFDEM_PROJECT_DIR = /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev
valid:yes critical:no - $CFDEM_PROJECT_USER_DIR = /home/xiay/CFDEM/xiay-PUBLIC-dev
valid:yes critical:yes - $CFDEM_SRC_DIR = /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src
valid:yes critical:yes - $CFDEM_SOLVER_DIR = /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/applications/solvers
valid:yes critical:yes - $CFDEM_TUT_DIR = /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/tutorials
valid:yes critical:yes - $CFDEM_LIGGGHTS_SRC_DIR = /home/xiay/LIGGGHTS/LIGGGHTS-PUBLIC/src
valid:yes critical:yes - $CFDEM_LPP_DIR = /home/xiay/LIGGGHTS/mylpp/src
valid:yes critical:yes - $CFDEM_ADD_LIBS_DIR = /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/lagrangian/cfdemParticle/etc
valid:NO critical:no - $CFDEM_PIZZA_DIR = /home/xiay/LIGGGHTS/PIZZA/gran_pizza_17Aug10/src does not exist
valid:yes critical:no - $CFDEM_TEST_HARNESS_PATH = /home/xiay/CFDEM/xiay-PUBLIC-dev/log/logFilesCFDEM-PUBLIC-dev
valid:NO critical:no - $C3PO_SRC_DIR = /home/xiay/CFDEM/CFDEMcoupling-PUBLIC-dev/src/c3po does not exist

library names
$CFDEM_LIGGGHTS_LIB_NAME = lmp_fedora_fpic
$CFDEM_LIB_NAME = lagrangianCFDEM-PUBLIC-dev
$LD_LIBRARY_PATH = /home/xiay/OpenFOAM/ThirdParty-dev/platforms/linux64Gcc/gperftools-svn/lib:/home/xiay/OpenFOAM/ThirdParty-dev/platforms/linux64Gcc/ParaView-5.0.1/lib/paraview-5.0:/home/xiay/OpenFOAM/OpenFOAM-dev/platforms/linux64GccDPInt32Opt/lib/openmpi-system:/home/xiay/OpenFOAM/ThirdParty-dev/platforms/linux64GccDPInt32/lib/openmpi-system:/usr/lib/openmpi/lib:/home/xiay/OpenFOAM/xiay-dev/platforms/linux64GccDPInt32Opt/lib:/home/xiay/OpenFOAM/site/dev/platforms/linux64GccDPInt32Opt/lib:/home/xiay/OpenFOAM/OpenFOAM-dev/platforms/linux64GccDPInt32Opt/lib:/home/xiay/OpenFOAM/ThirdParty-dev/platforms/linux64GccDPInt32/lib:/home/xiay/OpenFOAM/OpenFOAM-dev/platforms/linux64GccDPInt32Opt/lib/dummy
$WM_NCOMPPROCS =
*******************
g++:
/usr/bin/g++
g++ (Ubuntu 4.8.4-2ubuntu1~14.04.3) 4.8.4
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

gcc:
/usr/bin/gcc
gcc (Ubuntu 4.8.4-2ubuntu1~14.04.3) 4.8.4
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

mpic++:
/usr/bin/mpic++
g++ (Ubuntu 4.8.4-2ubuntu1~14.04.3) 4.8.4
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.

mpirun:
/usr/bin/mpirun
mpirun (Open MPI) 1.6.5

Report bugs to http://www.open-mpi.org/community/help/
**********************
additional packages...
c3po does not exist.
#################################################################################################

Thanks a lot for any comment and suggestion!

Forums:

CFDEM®coupling - User Forum

paul | Mon, 08/01/2016 - 09:19

I would suggest trying to set

I would suggest trying to set $CFDEM_ADD_LIBS_NAME to additionalLibs_3.0.x and repeating the process. Btw, you might also want to consider setting $WM_NCOMPPROCS to a higher value to speed up compilation.

Error when compiling CFDEM

Forums:

I would suggest trying to set

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