LIGGGHTS (Version LIGGGHTS-PUBLIC 3.8.0, compiled 2021-05-20-10:31:26 by alexsm, git commit 3b38a7dbe22018f905d4c5f792ab5ce644ef594e) atom_style granular boundary p f p newton off communicate single vel yes units si hard_particles yes region reg block 0.0 0.01 0.0 0.011 0 0.006 units box create_box 2 reg Created orthogonal box = (0 0 0) to (0.01 0.011 0.006) 2 by 2 by 1 MPI processor grid region ri block 0.0 0.01 0.000 0.01 0 0.006 units box neighbor 0.00002 bin neigh_modify delay 0 fix grav all gravity 9.81 vector 0.0 -1.0 0.0 #Material properties fix m1 all property/global youngsModulus peratomtype 70000000000.0 7000000000000.0 fix m2 all property/global poissonsRatio peratomtype 0.3 0.3 fix m3 all property/global coefficientRestitution peratomtypepair 2 1 1 1 1 fix m4 all property/global coefficientFriction peratomtypepair 2 0.6554244937770981 0.5 0.5 0.5 fix m5 all property/global coefficientRollingFriction peratomtypepair 2 0.5 0.5 0.5 0.5 fix m6 all property/global coefficientRollingViscousDamping peratomtypepair 2 0 0 0 0 fix m7 all property/global coefficientFrictionA peratomtypepair 2 0.0075 0 0 0 #pair style pair_style gran model hertz tangential history/own rolling_friction epsd WARNING: The contact model you specified is not located in any whitelist. Because of this the model will be run in an unoptimized version (increasing runtime by up to 20%). In order to optimize this model you have the following options: (i) Run the genAutoExamplesWhitelist.sh script in your LIGGGHTS(R) source folder to automatically parse the input script (ii) Add the model combination by hand to your style_contact_model_user.whitelist that can be found in your LIGGGHTS(R) source folder If you perform one of the steps above LIGGGHTS(R) needs to be recompiled to generate the optimized code. (../contact_models.h:365) pair_coeff * * timestep 1e-08 fix nvt all nve/sphere fix 2 all gravity 9.81 vector 0.0 -1.0 0 compute fc all pair/gran/local id pos force dump forcechain all local 50000 2021-05-20-10:48:41/post/dump.fc.*.liggghts c_fc[1] c_fc[2] c_fc[3] c_fc[4] c_fc[5] c_fc[6] c_fc[7] c_fc[8] c_fc[9] c_fc[10] c_fc[11] c_fc[12] #import mesh from cad: fix wbottom all mesh/surface/stress file meshes/Face_10_6.stl type 2 scale 1 move 0 0.0000 0 fix Walls all wall/gran model hertz tangential history/own rolling_friction epsd mesh n_meshes 1 meshes wbottom WARNING: The contact model you specified is not located in any whitelist. Because of this the model will be run in an unoptimized version (increasing runtime by up to 20%). In order to optimize this model you have the following options: (i) Run the genAutoExamplesWhitelist.sh script in your LIGGGHTS(R) source folder to automatically parse the input script (ii) Add the model combination by hand to your style_contact_model_user.whitelist that can be found in your LIGGGHTS(R) source folder If you perform one of the steps above LIGGGHTS(R) needs to be recompiled to generate the optimized code. (../contact_models.h:365) #particle distributions fix pts1 all particletemplate/sphere 15485863 atom_type 1 density constant 2500 radius constant 0.0002 fix pts2 all particletemplate/sphere 67867979 atom_type 1 density constant 2500 radius constant 0.00015 fix pts3 all particletemplate/sphere 86028121 atom_type 1 density constant 2500 radius constant 0.0001 fix pdd1 all particledistribution/discrete 15485867 3 pts1 .14 pts2 .29 pts3 .57 fix ins all insert/pack seed 32452843 distributiontemplate pdd1 vel constant 0. 0. 0.0 insert_every once overlapcheck yes all_in yes particles_in_region 4000 region ri run 1 Setting up run at Thu May 20 10:48:42 2021 INFO: Particle insertion ins: inserting every 0 steps Memory usage per processor = 9.13583 Mbytes Step Atoms KinEng CPU 0 0 0 0 INFO: Particle insertion ins: inserted 4000 particle templates (mass 6.224411e-05) at step 1 - a total of 4000 particle templates (mass 6.224411e-05) inserted so far. 1 4000 2.9950654e-19 0.003204952 Loop time of 0.00321876 on 4 procs for 1 steps with 4000 atoms, finish time Thu May 20 10:48:42 2021 Pair time (%) = 0.000222007 (6.89728) Neigh time (%) = 0.000523531 (16.265) Comm time (%) = 0.000167085 (5.191) Outpt time (%) = 2.19948e-05 (0.683331) Other time (%) = 0.00228414 (70.9634) Nlocal: 1000 ave 1104 max 892 min Histogram: 2 0 0 0 0 0 0 0 0 2 Nghost: 241 ave 270 max 206 min Histogram: 1 0 0 1 0 0 0 0 1 1 Neighs: 53 ave 61 max 45 min Histogram: 1 1 0 0 0 0 0 0 1 1 Total # of neighbors = 212 Ave neighs/atom = 0.053 Neighbor list builds = 1 Dangerous builds = 0 fix wtop all mesh/surface/stress/servo file meshes/Face_Triangle_0.5.stl type 2 scale 1 move 0 0.011 0 com 0.005 -0.00025 0.003 ctrlPV force axis 0. 1. 0. target_val -600 vel_max 100 unfix Walls fix Walls all wall/gran model hertz tangential history rolling_friction epsd mesh n_meshes 2 meshes wbottom wtop WARNING: The contact model you specified is not located in any whitelist. Because of this the model will be run in an unoptimized version (increasing runtime by up to 20%). In order to optimize this model you have the following options: (i) Run the genAutoExamplesWhitelist.sh script in your LIGGGHTS(R) source folder to automatically parse the input script (ii) Add the model combination by hand to your style_contact_model_user.whitelist that can be found in your LIGGGHTS(R) source folder If you perform one of the steps above LIGGGHTS(R) needs to be recompiled to generate the optimized code. (../contact_models.h:365) thermo_style custom step time atoms ke f_wtop[1] f_wtop[2] f_wtop[3] f_wtop[8] thermo 5000 thermo_modify lost ignore norm no dump dumpstl all stl 50000 2021-05-20-10:48:41/post/dumpstl_*.stl dump dmp all custom/vtk 50000 2021-05-20-10:48:41/post/dumpatom_*.vtk id x y z vx vy vz omegax omegay omegaz run 1200000 upto Setting up run at Thu May 20 10:48:42 2021 Memory usage per processor = 15.1249 Mbytes Step Time Atoms KinEng wtop[1] wtop[2] wtop[3] wtop[8] 1 1e-08 4000 2.9950654e-19 0 0 0 -0.00025 5000 5e-05 4000 2.9944664e-11 0 0 0 -0.00029998 10000 0.0001 4000 1.1978862e-10 0 0 0 -0.00034998 15000 0.00015 4000 2.6949662e-10 0 0 0 -0.00039998 20000 0.0002 4000 4.7910593e-10 0 0 0 -0.00044998 25000 0.00025 4000 7.4861655e-10 0 0 0 -0.00049998 30000 0.0003 4000 1.0780224e-09 0 0 0 -0.00054998 35000 0.00035 4000 1.4672273e-09 0 0 0 -0.00059998 40000 0.0004 4000 1.9162722e-09 0 0 0 -0.00064998 45000 0.00045 4000 2.4250666e-09 0 0 0 -0.00069998 50000 0.0005 4000 2.9937414e-09 0 0 0 -0.00074998 55000 0.00055 4000 4.426988e-08 0 0 0 -0.00079997993 60000 0.0006 4000 4.9831356e-07 0 0 0 -0.00084997911 65000 0.00065 4000 8.8089338e-07 0.10418574 0.21109367 0 -0.00089997836 70000 0.0007 4000 1.0868603e-06 0 0 0 -0.00094997801 75000 0.00075 4000 1.3897466e-06 0 0 0 -0.00099997745 80000 0.0008 4000 1.9258905e-06 0 0 0 -0.0010499764 85000 0.00085 4000 2.2639991e-06 0 0 0 -0.0010999757 90000 0.0009 4000 2.6769016e-06 0 0 0 -0.0011499749 95000 0.00095 4000 2.9857862e-06 0 0 0 -0.0011999742 100000 0.001 4000 3.1604409e-06 0 0 0 -0.0012499738 105000 0.00105 4000 3.5721198e-06 0 0 0 -0.0012999729 110000 0.0011 4000 3.7715807e-06 0.0055472812 0.0073619577 -0.0004359284 -0.0013499724 115000 0.00115 4000 4.055039e-06 0 0 0 -0.0013999718 120000 0.0012 4000 4.3497475e-06 0 0 0 -0.0014499711 125000 0.00125 4000 4.6720041e-06 0 0 0 -0.0014999704 130000 0.0013 4000 4.9336289e-06 0 0 0 -0.0015499698 135000 0.00135 4000 5.1668269e-06 0.039927563 0.011946547 0 -0.0015999692 140000 0.0014 4000 5.6020546e-06 0 0 0 -0.0016499683 145000 0.00145 4000 5.8912356e-06 -0.0067517055 -4.0766002e-17 0 -0.0016999676 150000 0.0015 4000 6.1306887e-06 -0.02328245 0.055551836 0.0013409495 -0.001749967 155000 0.00155 4000 6.2885544e-06 -0.020579201 0.022978081 0 -0.0017999666 160000 0.0016 4000 6.476717e-06 0 0 0 -0.001849966 165000 0.00165 4000 6.7639933e-06 0 0 0 -0.0018999654 170000 0.0017 4000 6.9698391e-06 0 0 0 -0.0019499649 175000 0.00175 4000 7.0984627e-06 0 0 0 -0.0019999644 180000 0.0018 4000 7.3147829e-06 0 0 0 -0.0020499639 185000 0.00185 4000 7.4238815e-06 -0.0067909775 2.6459608e-05 -0.00042327476 -0.0020999635 190000 0.0019 4000 7.5481492e-06 0.061279143 0.081705525 0 -0.0021499631 195000 0.00195 4000 7.8929839e-06 -0.077403011 0.074343044 -0.0087764424 -0.0021999623 200000 0.002 4000 8.2530724e-06 0 0 0 -0.0022499615 205000 0.00205 4000 8.5665607e-06 0 0 0 -0.0022999607 210000 0.0021 4000 8.653308e-06 0 0 0 -0.0023499603 215000 0.00215 4000 8.9089279e-06 0 0 0 -0.0023999598 220000 0.0022 4000 9.0020571e-06 0 0 0 -0.0024499594 225000 0.00225 4000 9.1780622e-06 0 0 0 -0.0024999588 230000 0.0023 4000 9.2920087e-06 0 0 0 -0.0025499585 235000 0.00235 4000 9.4980464e-06 0.019179846 0.014412181 0.00058595947 -0.0025999578 240000 0.0024 4000 9.6622231e-06 0.0098121364 0.0049899438 -0.0010681494 -0.0026499573 245000 0.00245 4000 9.9950314e-06 0.0052020741 4.2468887e-05 -0.0004685868 -0.0026999566 250000 0.0025 4000 1.0160805e-05 0.011334657 0.00030736888 -0.001847448 -0.002749956 255000 0.00255 4000 1.0282949e-05 0 0 0 -0.0027999556 260000 0.0026 4000 1.0355445e-05 0.0066021105 0.00050940657 -0.0017800385 -0.0028499553 265000 0.00265 4000 1.0593261e-05 -0.0011844245 0.072105471 -0.0038021724 -0.0028999546 270000 0.0027 4000 1.0799943e-05 -0.023624844 0.010879853 -0.0010807596 -0.002949954 275000 0.00275 4000 1.1018727e-05 0.0099694966 0.010229877 -0.0048475701 -0.0029999534 280000 0.0028 4000 1.1138889e-05 -0.016603853 0.037626131 0.0070739361 -0.0030499529 285000 0.00285 4000 1.1258542e-05 0 0 0 -0.0030999525 290000 0.0029 4000 1.1478924e-05 0 0 0 -0.003149952 295000 0.00295 4000 1.1679974e-05 0 0 0 -0.0031999514 300000 0.003 4000 1.1817056e-05 0 0 0 -0.0032499509 305000 0.00305 4000 1.191614e-05 -0.0016334824 0.0053361476 -0.0011245981 -0.0032999506 310000 0.0031 4000 1.2125931e-05 0.022477289 0.0059021571 -0.01032172 -0.00334995 315000 0.00315 4000 1.2314069e-05 0.0011585729 0.0012654023 -0.00063567707 -0.0033999495 320000 0.0032 4000 1.2536539e-05 -0.015880416 0.034356067 -0.0043747802 -0.0034499489 325000 0.00325 4000 1.2746049e-05 -0.096739397 0.047110683 -0.0029633754 -0.0034999484 330000 0.0033 4000 1.3012567e-05 -0.00021489655 8.0229588e-05 0.00011141576 -0.0035499477 335000 0.00335 4000 1.3116901e-05 -0.0016211337 0.0016277194 -0.00080724713 -0.0035999472 340000 0.0034 4000 1.3314258e-05 0 0 0 -0.0036499467 345000 0.00345 4000 1.3435955e-05 -0.01212289 0.0025056462 -0.002450571 -0.0036999463 350000 0.0035 4000 1.3627569e-05 0.028377182 0.012509657 -0.0014924522 -0.0037499458 355000 0.00355 4000 1.3792293e-05 0.0063849606 0.0081533529 0.0014835647 -0.0037999454 360000 0.0036 4000 1.4066724e-05 0 0 0 -0.0038499447 365000 0.00365 4000 1.4172095e-05 0.0044264389 0.0051086963 -0.0017433441 -0.0038999443 370000 0.0037 4000 1.4282815e-05 0.011197784 0.0048856602 0.0060167383 -0.0039499439 375000 0.00375 4000 1.4436324e-05 0 0 0 -0.0039999435 380000 0.0038 4000 1.4587842e-05 0 0 0 -0.0040499431 385000 0.00385 4000 1.468243e-05 0.02823635 0.023141926 0.00011270118 -0.0040999427 390000 0.0039 4000 1.4882438e-05 0.0032638525 0.0005540419 0.0012562202 -0.0041499422 395000 0.00395 4000 1.5004291e-05 0.011879325 0.009608716 0.0041094406 -0.0041999418 400000 0.004 4000 1.5177394e-05 0 0 0 -0.0042499413 405000 0.00405 4000 1.5315793e-05 0 0 0 -0.0042999409 410000 0.0041 4000 1.5487677e-05 0.016558558 0.0005332441 -0.0024213103 -0.0043499405 415000 0.00415 4000 1.5616373e-05 0 0 0 -0.0043999401 420000 0.0042 4000 1.5711841e-05 -0.0074862514 0.013837587 0.0046546033 -0.0044499397 425000 0.00425 4000 1.5828534e-05 -0.00051033631 5.2313741e-05 7.3245493e-05 -0.0044999394 430000 0.0043 4000 1.5986817e-05 -0.019005039 0.028758564 0.0064336252 -0.004549939 435000 0.00435 4000 1.6148727e-05 0 0 0 -0.0045999385 440000 0.0044 4000 1.6242054e-05 0.015253865 0.029665818 0.0072259491 -0.0046499383 445000 0.00445 4000 1.6380373e-05 -0.00058047197 0.00032929776 -0.00033139155 -0.0046999379 450000 0.0045 4000 1.6488039e-05 0 0 0 -0.0047499375 455000 0.00455 4000 1.6641571e-05 -0.00074410929 0.0011964951 -0.00060094158 -0.0047999371 460000 0.0046 4000 1.6711167e-05 0.0026038263 0.010368217 -0.0048028661 -0.0048499368 465000 0.00465 4000 1.692609e-05 0.0036060879 0.00027040396 0.00072189547 -0.0048999363 470000 0.0047 4000 1.7057315e-05 0 0 0 -0.0049499359 475000 0.00475 4000 1.7202823e-05 -0.0001305553 3.0221555e-05 -5.7101466e-05 -0.0049999356 480000 0.0048 4000 1.7370594e-05 0.046436436 0.027031186 -0.00087115147 -0.0050499352 485000 0.00485 4000 1.7435861e-05 -0.020074638 7.4622249e-05 -0.0012222268 -0.0050999349 490000 0.0049 4000 1.7599967e-05 0 0 0 -0.0051499345 495000 0.00495 4000 1.7718969e-05 0 0 0 -0.0051999342 500000 0.005 4000 1.7749507e-05 0.016623715 0.0018649688 -0.0035647966 -0.005249934 505000 0.00505 4000 1.7820856e-05 0 0 0 -0.0052999337 510000 0.0051 4000 1.7906456e-05 0 0 0 -0.0053499334 515000 0.00515 4000 1.7940504e-05 0.0023239135 0.026230944 0.013190872 -0.0053999332 520000 0.0052 4000 1.8029262e-05 0.017211887 0.011739376 0.0043764863 -0.005449933 525000 0.00525 4000 1.8095962e-05 -0.0087230802 0.0039784011 0.00063123385 -0.0054999327 530000 0.0053 4000 1.8147697e-05 0 0 0 -0.0055499325 535000 0.00535 4000 1.8230843e-05 -0.038187017 0.01409828 -0.0014843444 -0.0055999322 540000 0.0054 4000 1.8328663e-05 -0.0028137574 0.0028054887 0.0018166342 -0.0056499319 545000 0.00545 4000 1.8386938e-05 2.0502608e-06 4.5332449e-06 1.1256689e-06 -0.0056999316 550000 0.0055 4000 1.8445556e-05 0 0 0 -0.0057499313 555000 0.00555 4000 1.8495711e-05 -0.011782628 0.0045771235 -0.0026909529 -0.0057999311 560000 0.0056 4000 1.8535824e-05 0.00021623741 0.00026859236 6.3034309e-05 -0.0058499309 565000 0.00565 4000 1.8634827e-05 -0.0072905042 0.020951022 -0.0025305958 -0.0058999305 570000 0.0057 4000 1.869777e-05 -0.0064044679 0.010168734 -0.0015850411 -0.0059499303 575000 0.00575 4000 1.880619e-05 -0.0013517914 0.0018447781 0.0012023145 -0.00599993 580000 0.0058 4000 1.885905e-05 0.0085867101 0.0082864222 -0.00017736013 -0.0060499298 585000 0.00585 4000 1.8952111e-05 0 0 0 -0.0060999295 590000 0.0059 4000 1.9001818e-05 0 0 0 -0.0061499293 595000 0.00595 4000 1.9125825e-05 0 0 0 -0.006199929 600000 0.006 4000 1.9231643e-05 0 0 0 -0.0062499287 605000 0.00605 4000 1.9376711e-05 0 0 0 -0.0062999283 610000 0.0061 4000 1.9499837e-05 0 0 0 -0.0063499279 615000 0.00615 4000 1.9596323e-05 -0.0098809683 0.055744662 -0.009308069 -0.0063999276 620000 0.0062 4000 1.9729729e-05 0.03829839 0.035336547 0.0051646248 -0.0064499272 625000 0.00625 4000 1.9825338e-05 0 0 0 -0.0064999269 630000 0.0063 4000 1.9956956e-05 0.015373805 0.013187592 -0.00011014237 -0.0065499266 635000 0.00635 4000 2.0148321e-05 0 0 0 -0.0065999261 640000 0.0064 4000 2.025444e-05 0 0 0 -0.0066499258 645000 0.00645 4000 2.0405752e-05 -0.011177027 0.007207933 -0.0013253546 -0.0066999255 650000 0.0065 4000 2.0491105e-05 0 0 0 -0.0067499252 655000 0.00655 4000 2.0609433e-05 0 0 0 -0.0067999249 660000 0.0066 4000 2.0719194e-05 0 0 0 -0.0068499245 665000 0.00665 4000 2.0913821e-05 0.022455795 0.0051043693 0.00014011618 -0.0068999241 670000 0.0067 4000 2.1063925e-05 0 0 0 -0.0069499237 675000 0.00675 4000 2.1092189e-05 0.0017470511 5.5238999e-06 -9.8120592e-05 -0.0069999235 680000 0.0068 4000 2.1181108e-05 0 0 0 -0.0070499232 685000 0.00685 4000 2.1267164e-05 0.00055532548 6.418889e-05 0.00018043161 -0.007099923 690000 0.0069 4000 2.1436106e-05 0 0 0 -0.0071499226 695000 0.00695 4000 2.1530766e-05 0.0088641781 0.012195489 -0.0013172145 -0.0071999223 700000 0.007 4000 2.172131e-05 0 0 0 -0.0072499218 705000 0.00705 4000 2.1833458e-05 -0.0035530451 0.0010270969 0.0016905992 -0.0072999215 710000 0.0071 4000 2.18962e-05 0 0 0 -0.0073499213 715000 0.00715 4000 2.2014546e-05 -0.0027270703 0.012427901 0.0047537703 -0.007399921 720000 0.0072 4000 2.2094266e-05 0.014062671 0.00090648162 0.0034829974 -0.0074499207 725000 0.00725 4000 2.2252375e-05 0.00020958377 0.00025635184 6.6633215e-05 -0.0074999203 730000 0.0073 4000 2.2361036e-05 0.0035048369 0.040410619 -0.0048491415 -0.00754992 735000 0.00735 4000 2.2475551e-05 0.011408031 0.0070445888 -0.00039604081 -0.0075999196 740000 0.0074 4000 2.270221e-05 -0.0069016301 0.0074099475 0.00042842663 -0.0076499191 745000 0.00745 4000 2.2891635e-05 -0.0047174155 0.011441112 -0.0015456362 -0.0076999187 750000 0.0075 4000 2.3058125e-05 -0.0042052147 0.003589609 0.0016062999 -0.0077499183 755000 0.00755 4000 2.3202745e-05 -0.00038879939 0.00010073465 -0.0001540465 -0.0077999179 760000 0.0076 4000 2.3344371e-05 0 0 0 -0.0078499175 765000 0.00765 4000 2.3501479e-05 0.002040824 0.0011595841 0.0011653457 -0.0078999172 770000 0.0077 4000 2.3574672e-05 -0.018053776 0.0076054865 0.006060676 -0.0079499169 775000 0.00775 4000 2.3644189e-05 -0.0033357735 0.0060882524 -1.8428371e-05 -0.0079999166 780000 0.0078 4000 2.3784345e-05 0 0 0 -0.0080499163 785000 0.00785 4000 2.3905547e-05 -0.0090917695 0.0039611072 -0.0017533888 -0.008099916 790000 0.0079 4000 2.4007181e-05 0.0020476781 0.00056699511 -0.00095911984 -0.0081499157 795000 0.00795 4000 2.4101274e-05 0.011811524 0.0098025033 0.00075489074 -0.0081999154 800000 0.008 4000 2.4181976e-05 0.0002325923 4.648231e-07 1.0390006e-05 -0.0082499152 805000 0.00805 4000 2.4290328e-05 0.0098473525 0.0029879808 -0.0019181871 -0.0082999149 810000 0.0081 4000 2.4442344e-05 0.001477659 0.0010857363 -2.1722503e-06 -0.0083499145 815000 0.00815 4000 2.4518009e-05 0 0 0 -0.0083999143 820000 0.0082 4000 2.4654442e-05 0.0062159862 0.00095557638 0.0022923797 -0.0084499139 825000 0.00825 4000 2.4794202e-05 0.0038610645 0.0021190464 0.00072568163 -0.0084999135 830000 0.0083 4000 2.4853684e-05 3.1752856e-05 8.4794633e-05 -3.680374e-05 -0.0085499133 835000 0.00835 4000 2.4953043e-05 0.0037553667 0.0073335406 -0.00099583292 -0.008599913 840000 0.0084 4000 2.5057833e-05 0.0047977301 0.0063258105 -0.00058105261 -0.0086499127 845000 0.00845 4000 2.5172425e-05 0.010653475 0.0027553672 0.0013395998 -0.0086999123 850000 0.0085 4000 2.5301728e-05 8.3075794e-05 0.0017044752 0.00079349103 -0.0087499119 855000 0.00855 4000 2.5451704e-05 0.0071201124 0.010321301 -0.00073182119 -0.0087999114 860000 0.0086 4000 2.5461294e-05 -0.013775012 0.011705215 -0.0025063244 -0.0088499112 865000 0.00865 4000 2.545541e-05 0.01037348 0.01300585 0.0007787678 -0.0088999109 870000 0.0087 4000 2.5442764e-05 0 0 0 -0.0089499106 875000 0.00875 4000 2.538655e-05 0 0 0 -0.0089999104 880000 0.0088 4000 2.5370164e-05 0 0 0 -0.0090499101 885000 0.00885 4000 2.530767e-05 -0.018642326 0.010662511 0.00080685583 -0.0090999098 890000 0.0089 4000 2.5160472e-05 0 0 0 -0.0091499095 895000 0.00895 4000 2.5021203e-05 0.0055698297 0.0026884943 -0.0025304854 -0.0091999091 900000 0.009 4000 2.4833837e-05 -0.0071534694 0.0063459337 -0.0019815191 -0.0092499087 905000 0.00905 4000 2.4583236e-05 0.0033519588 0.0040600363 -0.0011163124 -0.0092999083 910000 0.0091 4000 2.4386725e-05 -0.0037621218 0.00041051304 -0.00095879489 -0.0093499079 915000 0.00915 4000 2.3983553e-05 0.0034185758 0.0014051973 0.00025495191 -0.0093999074 920000 0.0092 4000 2.356448e-05 -0.00047117376 0.0014502334 -0.00042401132 -0.0094499069 925000 0.00925 4000 2.3210445e-05 -0.0064206531 0.0038732192 -0.0015372632 -0.0094999058 930000 0.0093 4000 2.2600232e-05 0.0040492555 7.5867328e-05 -0.0005503538 -0.0095499051 935000 0.00935 4000 2.2176966e-05 0.025637245 0.020550264 0.002123134 -0.0095999038 940000 0.0094 4000 2.1760897e-05 -0.018773527 0.091864566 -0.0043175062 -0.0096499018 945000 0.00945 4000 2.1169161e-05 -0.0041232564 0.0035382749 0.001264774 -0.0096998995 950000 0.0095 4000 2.1007179e-05 0.038445725 0.027679527 0.0062414301 -0.0097498961 955000 0.00955 4000 2.1391108e-05 -0.023040565 0.018080353 0.0011721651 -0.0097998901 960000 0.0096 4000 2.1682697e-05 0.073769871 0.18842211 0.0097430191 -0.0098498827 965000 0.00965 4000 2.2949782e-05 0.020660419 0.22986645 0.017664614 -0.0098998697 970000 0.0097 4000 2.2964391e-05 -0.16424187 0.46418762 0.012158532 -0.0099498528 975000 0.00975 4000 2.3990819e-05 -0.97955677 55.252146 5.4934189 -0.0099983842 980000 0.0098 4000 3.2435676e-05 -5.9936089 186.16133 20.691617 -0.010038654 985000 0.00985 4000 1.9165781e-05 -5.7765852 349.35072 27.072766 -0.010066913 990000 0.0099 4000 8.5652524e-06 2.0052355 484.82636 32.258311 -0.010082144 995000 0.00995 4000 5.0294179e-06 3.3211663 553.89248 35.241189 -0.01008891 1000000 0.01 4000 3.3213724e-06 7.2337928 584.8598 37.220446 -0.010091233 1005000 0.01005 4000 5.1723184e-06 7.4350218 590.09443 33.807977 -0.010092156 1010000 0.0101 4000 8.8354925e-06 9.5462398 593.14698 34.520964 -0.010092784 1015000 0.01015 4000 2.1833058e-06 5.7736842 595.04653 33.303433 -0.010093292 1020000 0.0102 4000 5.6600675e-06 -5.8628545 582.79355 34.547422 -0.010094212 1025000 0.01025 4000 5.4578462e-06 -9.1467645 592.28403 34.87104 -0.010095352 1030000 0.0103 4000 4.1395817e-06 -8.1044035 596.58388 33.921665 -0.010095785 1035000 0.01035 4000 3.5314833e-06 -7.0338086 598.43632 33.706527 -0.010095954 1040000 0.0104 4000 4.9189949e-06 -6.494197 598.54205 31.577867 -0.010096064 1045000 0.01045 4000 7.5695863e-06 -6.4513592 599.54848 30.70138 -0.010096166 1050000 0.0105 4000 4.5193322e-06 -6.4532311 599.4272 30.02389 -0.010096264 1055000 0.01055 4000 1.0372434e-05 -6.9345512 598.88246 30.65652 -0.010096344 1060000 0.0106 4000 4.4638259e-06 -6.1996341 598.39521 32.021613 -0.010096423 1065000 0.01065 4000 1.005082e-05 -7.1068773 598.12542 26.894208 -0.010096521 1070000 0.0107 4000 5.1620829e-06 -6.0500566 594.66625 30.654638 -0.010096817 1075000 0.01075 4000 1.8676626e-05 -5.3956363 597.22083 27.604228 -0.010097115 1080000 0.0108 4000 2.1655356e-05 -6.1332601 596.39843 27.897814 -0.010097394 1085000 0.01085 4000 1.5120597e-06 -7.3089336 595.98899 27.844505 -0.010097742 1090000 0.0109 4000 3.4038651e-06 -5.216027 593.26085 24.902211 -0.010098399 1095000 0.01095 4000 3.7454446e-06 -4.6332417 598.12143 27.658583 -0.010098742 1100000 0.011 4000 2.4302674e-06 -5.188404 597.38323 17.976261 -0.010098894 1105000 0.01105 4000 3.7023473e-06 -4.7141306 597.27042 23.866052 -0.010098974 1110000 0.0111 4000 4.9287021e-06 -7.1409775 596.02048 25.277217 -0.010099047 1115000 0.01115 4000 5.8709728e-06 -7.3327118 596.77369 29.105395 -0.01009915 1120000 0.0112 4000 5.7045064e-06 -7.9608839 598.96557 28.484007 -0.010099218 1125000 0.01125 4000 5.3092352e-06 -3.9370105 600.41392 27.302691 -0.010099243 1130000 0.0113 4000 1.8381158e-06 -6.2494835 598.97272 28.988594 -0.010099262 1135000 0.01135 4000 4.9507706e-06 -5.8542891 597.59114 27.579621 -0.010099329 1140000 0.0114 4000 5.1926899e-06 -7.4277951 597.74747 27.798683 -0.010099402 1145000 0.01145 4000 6.4019599e-06 -4.618594 596.61472 27.471203 -0.010099458 1150000 0.0115 4000 9.5098357e-06 -8.2818867 597.93573 23.173533 -0.010099566 1155000 0.01155 4000 6.8546709e-06 -5.9031198 598.8855 24.155855 -0.01009963 1160000 0.0116 4000 2.0110276e-06 -1.5300769 599.19477 20.020596 -0.010099673 1165000 0.01165 4000 2.8295297e-06 -6.2090282 597.97058 18.971714 -0.010099739 1170000 0.0117 4000 3.5174054e-06 -3.0524386 599.81842 22.134558 -0.010099808 1175000 0.01175 4000 3.717221e-06 -6.5686951 599.43093 25.764631 -0.010099854 1180000 0.0118 4000 2.6414373e-06 -7.2805317 600.14577 29.996016 -0.01009988 1185000 0.01185 4000 3.5407929e-06 -4.6579374 596.06981 30.83315 -0.010099996 1190000 0.0119 4000 5.4275969e-06 -3.7388048 599.62732 26.649729 -0.010100211 1195000 0.01195 4000 4.9963474e-06 -5.5270581 600.23604 21.774652 -0.010100279 1200000 0.012 4000 2.8225794e-06 -5.3730981 600.90226 22.23995 -0.0101003 Loop time of 332.459 on 4 procs for 1199999 steps with 4000 atoms, finish time Thu May 20 10:54:14 2021 Pair time (%) = 46.7069 (14.0489) Neigh time (%) = 1.19308 (0.358865) Comm time (%) = 18.366 (5.52431) Outpt time (%) = 0.420025 (0.126339) Other time (%) = 265.773 (79.9415) Nlocal: 1000 ave 2019 max 0 min Histogram: 2 0 0 0 0 0 0 0 0 2 Nghost: 252.75 ave 514 max 0 min Histogram: 2 0 0 0 0 0 0 0 0 2 Neighs: 2314.25 ave 4757 max 0 min Histogram: 2 0 0 0 0 0 0 0 0 2 Total # of neighbors = 9257 Ave neighs/atom = 2.31425 Neighbor list builds = 2421 Dangerous builds = 0 variable ygb equal 0.0004 region gb block 0 0.01 0. ${ygb} 0 0.006 units box region gb block 0 0.01 0. 0.0004 0 0.006 units box group granbottom region gb 2012 atoms in group granbottom region gs block 0 0.01 ${ygb} 0.01 0 0.006 units box region gs block 0 0.01 0.0004 0.01 0 0.006 units box group gransample region gs 1987 atoms in group gransample unfix nvt fix nvt gransample nve/sphere undump dumpstl unfix Walls unfix wbottom fix Walls all wall/gran model hertz tangential history rolling_friction epsd mesh n_meshes 1 meshes wtop WARNING: The contact model you specified is not located in any whitelist. Because of this the model will be run in an unoptimized version (increasing runtime by up to 20%). In order to optimize this model you have the following options: (i) Run the genAutoExamplesWhitelist.sh script in your LIGGGHTS(R) source folder to automatically parse the input script (ii) Add the model combination by hand to your style_contact_model_user.whitelist that can be found in your LIGGGHTS(R) source folder If you perform one of the steps above LIGGGHTS(R) needs to be recompiled to generate the optimized code. (../contact_models.h:365) dump dumpstl all stl 50000 2021-05-20-10:48:41/post/dumpstl_*.stl dump dmpgb granbottom custom/vtk 50000 2021-05-20-10:48:41/post/dumpatomgb_*.vtk id x y z vx vy vz omegax omegay omegaz fix shearmove granbottom move linear 1e-06 0 0 run 400000 Setting up run at Thu May 20 10:54:14 2021 Memory usage per processor = 15.1446 Mbytes Step Time Atoms KinEng wtop[1] wtop[2] wtop[3] wtop[8] 1200000 0.012 4000 2.8225794e-06 -18.444705 636.08113 22.23995 -0.0101003 1205000 0.01205 4000 1.964275e-05 28.663882 585.42436 46.220581 -0.010102434 1210000 0.0121 4000 4.8293115e-06 24.323158 580.40515 49.968276 -0.010103617 1215000 0.01215 4000 3.8178079e-06 55.49598 591.22431 87.201825 -0.010104556 1220000 0.0122 4000 9.7199153e-06 58.604671 590.71632 88.830742 -0.010105316 1225000 0.01225 4000 1.4751863e-05 51.359299 584.55623 82.96322 -0.010106366 1230000 0.0123 4000 3.1179373e-06 45.762868 584.37337 84.791795 -0.01010748 1235000 0.01235 4000 8.2755103e-06 48.217739 591.70832 76.368568 -0.010108343 1240000 0.0124 4000 6.5976926e-06 39.835116 595.61929 71.078725 -0.01010894 1245000 0.01245 4000 6.799282e-06 44.604644 590.2474 74.744335 -0.010109432 1250000 0.0125 4000 1.5825585e-05 43.164358 598.91893 61.733586 -0.01010982 1255000 0.01255 4000 9.6898115e-06 40.701097 603.04473 60.224886 -0.01010994 1260000 0.0126 4000 1.4302565e-05 45.855775 594.22394 69.469965 -0.010110026 1265000 0.01265 4000 1.295486e-05 44.733869 598.06846 70.663757 -0.010110134 1270000 0.0127 4000 1.2744337e-05 53.499819 597.0036 73.234427 -0.010110184 1275000 0.01275 4000 1.5037174e-06 47.246564 599.9334 56.496825 -0.01011027 1280000 0.0128 4000 7.0478863e-06 50.700838 598.17538 56.303996 -0.01011034 1285000 0.01285 4000 1.0932147e-05 56.633249 604.23976 55.745376 -0.010110439 1290000 0.0129 4000 6.6113694e-06 60.651941 596.61705 53.978123 -0.010110571 1295000 0.01295 4000 8.117548e-06 58.112075 596.16926 66.07732 -0.010110658 1300000 0.013 4000 1.0041748e-05 57.515866 594.96242 66.510795 -0.010110656 1305000 0.01305 4000 7.3128225e-06 57.960289 599.2226 58.825467 -0.010110655 1310000 0.0131 4000 5.3742361e-06 61.711631 600.11696 63.055019 -0.010110694 1315000 0.01315 4000 1.7053396e-06 54.725107 597.98445 56.159096 -0.010110711 1320000 0.0132 4000 2.9279247e-06 59.525742 599.47302 62.505785 -0.010110709 1325000 0.01325 4000 9.9308021e-06 59.206037 598.74569 60.434699 -0.010110735 1330000 0.0133 4000 1.531985e-05 59.80526 600.3256 59.325779 -0.010110768 1335000 0.01335 4000 1.1420077e-05 58.172038 601.96386 59.350308 -0.010110811 1340000 0.0134 4000 1.0938245e-05 59.969886 599.42896 57.401973 -0.010110843 1345000 0.01345 4000 4.3169151e-06 61.293161 594.48683 63.132552 -0.010110847 1350000 0.0135 4000 1.3477223e-05 61.850831 598.23408 61.825482 -0.010110887 1355000 0.01355 4000 1.2440767e-05 62.590178 600.40247 59.062808 -0.010110873 1360000 0.0136 4000 8.9909053e-06 56.39717 601.91342 61.56254 -0.010110918 1365000 0.01365 4000 1.7287016e-06 62.403393 600.12693 62.237194 -0.010110944 1370000 0.0137 4000 1.0094238e-05 59.582545 601.21795 59.019807 -0.010110964 1375000 0.01375 4000 1.6441532e-06 62.39106 597.46307 59.102712 -0.010110992 1380000 0.0138 4000 4.7681122e-06 53.900847 603.43923 58.184531 -0.010111042 1385000 0.01385 4000 5.4798128e-06 52.361089 601.27659 67.034328 -0.010111057 1390000 0.0139 4000 5.3978862e-06 58.45601 596.67309 58.003333 -0.010111067 1395000 0.01395 4000 1.9223201e-06 58.699339 599.24744 59.368227 -0.010111082 1400000 0.014 4000 9.3060797e-06 60.227344 604.05858 58.539436 -0.010111096 1405000 0.01405 4000 8.2933412e-06 57.72464 599.8586 57.376721 -0.010111126 1410000 0.0141 4000 5.9998326e-06 59.151124 595.33795 61.854287 -0.010111147 1415000 0.01415 4000 7.2985458e-06 56.430803 601.51013 58.29843 -0.010111136 1420000 0.0142 4000 6.501792e-06 55.829644 594.80197 58.608346 -0.010111162 1425000 0.01425 4000 1.1287516e-05 59.302919 595.49231 61.336162 -0.010111202 1430000 0.0143 4000 4.8460942e-06 58.912208 602.96145 61.949769 -0.010111272 1435000 0.01435 4000 8.3830085e-06 57.3447 599.87571 61.143404 -0.01011132 1440000 0.0144 4000 4.7649824e-06 58.262941 599.53017 62.861572 -0.010111306 1445000 0.01445 4000 6.7805466e-06 56.56384 593.61065 59.119622 -0.010111315 1450000 0.0145 4000 3.0872827e-06 58.587382 604.00153 57.303535 -0.01011133 1455000 0.01455 4000 5.1128667e-06 57.376793 599.30926 60.27413 -0.010111335 1460000 0.0146 4000 4.3556612e-06 58.954183 598.46737 60.782531 -0.010111362 1465000 0.01465 4000 4.6927282e-06 56.189893 601.12341 58.732487 -0.010111375 1470000 0.0147 4000 1.6989804e-06 54.425752 598.76541 58.941074 -0.010111362 1475000 0.01475 4000 3.9446802e-06 54.373328 599.79846 59.304639 -0.010111387 1480000 0.0148 4000 2.8753768e-06 55.875768 603.19866 59.458166 -0.01011139 1485000 0.01485 4000 3.6505356e-06 53.153021 595.9006 59.969797 -0.010111358 1490000 0.0149 4000 4.0849462e-06 52.039972 601.68621 55.043655 -0.010111369 1495000 0.01495 4000 3.479431e-06 55.072205 598.53626 55.530957 -0.010111377 1500000 0.015 4000 3.4568649e-06 54.870772 597.12005 61.34365 -0.010111385 1505000 0.01505 4000 5.1769348e-06 56.904689 601.66549 56.512442 -0.01011138 1510000 0.0151 4000 1.4273633e-06 55.496046 603.17998 54.17868 -0.010111358 1515000 0.01515 4000 4.1669777e-06 55.517979 602.75761 52.986428 -0.010111342 1520000 0.0152 4000 7.7568696e-06 52.432766 606.78947 57.259799 -0.010111325 1525000 0.01525 4000 7.3455065e-06 55.111362 597.48191 52.431797 -0.010111337 1530000 0.0153 4000 5.5374203e-06 54.627951 601.91168 55.980206 -0.010111331 1535000 0.01535 4000 2.8589239e-06 53.049144 603.67588 54.722294 -0.010111324 1540000 0.0154 4000 4.1162723e-06 54.582063 598.14943 54.864683 -0.010111304 1545000 0.01545 4000 3.0488792e-06 53.31562 598.6066 57.452623 -0.010111301 1550000 0.0155 4000 4.9208541e-06 56.13798 600.73044 53.253841 -0.010111293 1555000 0.01555 4000 3.537248e-06 52.985843 603.37584 53.374696 -0.010111314 1560000 0.0156 4000 4.1943672e-06 54.815035 594.61522 60.992424 -0.010111313 1565000 0.01565 4000 1.5275177e-06 50.679495 605.93375 54.264436 -0.010111296 1570000 0.0157 4000 4.0144145e-06 51.360335 595.72924 61.000512 -0.010111316 1575000 0.01575 4000 1.716047e-06 51.964785 606.18927 47.453904 -0.01011131 1580000 0.0158 4000 3.5245153e-06 55.17256 594.69126 58.517302 -0.010111307 1585000 0.01585 4000 4.3337724e-06 51.4254 604.47661 51.802529 -0.010111324 1590000 0.0159 4000 3.7000605e-06 51.06183 599.20613 52.599755 -0.010111319 1595000 0.01595 4000 2.878786e-06 49.302676 594.75187 56.884846 -0.010111319 1600000 0.016 4000 6.3590632e-06 49.840826 604.21145 50.624198 -0.010111306 Loop time of 200.272 on 4 procs for 400000 steps with 4000 atoms, finish time Thu May 20 10:57:34 2021 Pair time (%) = 45.8346 (22.8862) Neigh time (%) = 0.170278 (0.0850231) Comm time (%) = 4.2562 (2.12521) Outpt time (%) = 0.239189 (0.119432) Other time (%) = 149.772 (74.7842) Nlocal: 1000 ave 2017 max 0 min Histogram: 2 0 0 0 0 0 0 0 0 2 Nghost: 252 ave 512 max 0 min Histogram: 2 0 0 0 0 0 0 0 0 2 Neighs: 2488.75 ave 5011 max 0 min Histogram: 2 0 0 0 0 0 0 0 0 2 Total # of neighbors = 9955 Ave neighs/atom = 2.48875 Neighbor list builds = 210 Dangerous builds = 0 unfix shearmove